RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 SEZ6Q53EL9 994 aa18.52■□□□□ 0.56
TMED1-203ENST00000588259 CD300LGQ6UXG3 332 aa18.52■□□□□ 0.56
TMED1-203ENST00000588259 ZBTB45Q96K62 511 aaPredicted RBP18.52■□□□□ 0.56
TMED1-203ENST00000588259 ZMAT2Q96NC0 199 aaKnown RBP18.52■□□□□ 0.56
TMED1-203ENST00000588259 SLC2A4RGQ9NR83 387 aa18.52■□□□□ 0.56
TMED1-203ENST00000588259 SIT1Q9Y3P8 196 aa18.52■□□□□ 0.56
TMED1-203ENST00000588259 NOTCH4Q99466 2003 aa18.51■□□□□ 0.55
TMED1-203ENST00000588259 KCNE1P15382 129 aa18.51■□□□□ 0.55
TMED1-203ENST00000588259 GJB2P29033 226 aa18.51■□□□□ 0.55
TMED1-203ENST00000588259 CACNB1Q02641 598 aaPredicted RBP18.51■□□□□ 0.55
TMED1-203ENST00000588259 ALKAL1Q6UXT8 129 aa18.51■□□□□ 0.55
TMED1-203ENST00000588259 NPAS3Q8IXF0 933 aa18.51■□□□□ 0.55
TMED1-203ENST00000588259 RASSF8Q8NHQ8 419 aa18.51■□□□□ 0.55
TMED1-203ENST00000588259 KCNG4Q8TDN1 519 aa18.51■□□□□ 0.55
TMED1-203ENST00000588259 SHDQ96IW2 340 aa18.51■□□□□ 0.55
TMED1-203ENST00000588259 TMX3Q96JJ7 454 aa18.51■□□□□ 0.55
TMED1-203ENST00000588259 PNMA5Q96PV4 448 aa18.51■□□□□ 0.55
TMED1-203ENST00000588259 FOXQ1Q9C009 403 aa18.51■□□□□ 0.55
TMED1-203ENST00000588259 UPF2Q9HAU5 1272 aaKnown RBP18.51■□□□□ 0.55
TMED1-203ENST00000588259 CNTN3Q9P232 1028 aa18.51■□□□□ 0.55
TMED1-203ENST00000588259 DNMT3BQ9UBC3 853 aaKnown RBP18.51■□□□□ 0.55
TMED1-203ENST00000588259 SPTBN4Q9H254 2564 aa18.51■□□□□ 0.55
TMED1-203ENST00000588259 VPS13AQ96RL7 3174 aa18.5■□□□□ 0.55
TMED1-203ENST00000588259 NPHP3-ACAD11A0A0J9YXS1 232 aa18.5■□□□□ 0.55
TMED1-203ENST00000588259 H7C4K7 107 aa18.5■□□□□ 0.55
TMED1-203ENST00000588259 TOM1L1O75674 476 aa18.5■□□□□ 0.55
TMED1-203ENST00000588259 RHOP08100 348 aa18.5■□□□□ 0.55
TMED1-203ENST00000588259 POU2F2P09086 479 aa18.5■□□□□ 0.55
TMED1-203ENST00000588259 PLA2G4BP0C869 781 aa18.5■□□□□ 0.55
TMED1-203ENST00000588259 PROZP22891 400 aa18.5■□□□□ 0.55
TMED1-203ENST00000588259 RPL9P32969 192 aaKnown RBP18.5■□□□□ 0.55
TMED1-203ENST00000588259 DHX8Q14562 1220 aaKnown RBP18.5■□□□□ 0.55
TMED1-203ENST00000588259 CTXN3Q4LDR2 81 aa18.5■□□□□ 0.55
TMED1-203ENST00000588259 XKR4Q5GH76 650 aa18.5■□□□□ 0.55
TMED1-203ENST00000588259 TMEM161BQ8NDZ6 487 aa18.5■□□□□ 0.55
TMED1-203ENST00000588259 SPIRE2Q8WWL2 714 aa18.5■□□□□ 0.55
TMED1-203ENST00000588259 CYP4F11Q9HBI6 524 aa18.5■□□□□ 0.55
TMED1-203ENST00000588259 KCNG1Q9UIX4 513 aa18.5■□□□□ 0.55
TMED1-203ENST00000588259 KCNH3Q9ULD8 1083 aa18.5■□□□□ 0.55
TMED1-203ENST00000588259 ABLIM1O14639 778 aa18.49■□□□□ 0.55
TMED1-203ENST00000588259 SYN3O14994 580 aa18.49■□□□□ 0.55
TMED1-203ENST00000588259 CLDN3O15551 220 aa18.49■□□□□ 0.55
TMED1-203ENST00000588259 CXCL8P10145 99 aa18.49■□□□□ 0.55
TMED1-203ENST00000588259 MAPTP10636 758 aaKnown RBP18.49■□□□□ 0.55
TMED1-203ENST00000588259 SNW1Q13573 536 aaKnown RBP18.49■□□□□ 0.55
TMED1-203ENST00000588259 SLC8B1Q6J4K2 584 aa18.49■□□□□ 0.55
TMED1-203ENST00000588259 PHLDB3Q6NSJ2 640 aa18.49■□□□□ 0.55
TMED1-203ENST00000588259 RTL10Q7L3V2 364 aa18.49■□□□□ 0.55
TMED1-203ENST00000588259 SYT2Q8N9I0 419 aaPredicted RBP18.49■□□□□ 0.55
TMED1-203ENST00000588259 ZNF461Q8TAF7 563 aa18.49■□□□□ 0.55
TMED1-203ENST00000588259 MCRS1Q96EZ8 462 aa18.49■□□□□ 0.55
TMED1-203ENST00000588259 CORO1BQ9BR76 489 aa18.49■□□□□ 0.55
TMED1-203ENST00000588259 TUBGCP4Q9UGJ1 667 aa18.49■□□□□ 0.55
TMED1-203ENST00000588259 SMC3Q9UQE7 1217 aa18.49■□□□□ 0.55
TMED1-203ENST00000588259 WDR27A2RRH5 827 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 H0YCG3 227 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 CPB1P15086 417 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 CEBPBP17676 345 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 MARCKSP29966 332 aaPredicted RBP18.48■□□□□ 0.55
TMED1-203ENST00000588259 SLC12A3P55017 1021 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 SPAG1Q07617 926 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 UBXN2BQ14CS0 331 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 MLF2Q15773 248 aaPredicted RBP18.48■□□□□ 0.55
TMED1-203ENST00000588259 HYIQ5T013 277 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 ZNF280DQ6N043 979 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 ZPBP2Q6X784 338 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 GPBP1Q86WP2 473 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 ADSSL1Q8N142 457 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 PJA1Q8NG27 643 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 CALML4Q96GE6 196 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 TBC1D32Q96NH3 1257 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 ZHX3Q9H4I2 956 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 KCND2Q9NZV8 630 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 LARSQ9P2J5 1176 aaKnown RBP18.48■□□□□ 0.55
TMED1-203ENST00000588259 FBXL5Q9UKA1 691 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 R4GN57 208 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 GVINP1Q7Z2Y8 2422 aa18.48■□□□□ 0.55
TMED1-203ENST00000588259 COL4A3Q01955 1670 aa18.47■□□□□ 0.55
TMED1-203ENST00000588259 CD2BP2O95400 341 aaKnown RBP18.47■□□□□ 0.55
TMED1-203ENST00000588259 KRT18P05783 430 aaKnown RBP18.47■□□□□ 0.55
TMED1-203ENST00000588259 PTPN2P17706 415 aa18.47■□□□□ 0.55
TMED1-203ENST00000588259 UBA7P41226 1012 aa18.47■□□□□ 0.55
TMED1-203ENST00000588259 LIG4P49917 911 aa18.47■□□□□ 0.55
TMED1-203ENST00000588259 PFKPQ01813 784 aa18.47■□□□□ 0.55
TMED1-203ENST00000588259 SLC5A9Q2M3M2 681 aa18.47■□□□□ 0.55
TMED1-203ENST00000588259 SLC10A6Q3KNW5 377 aa18.47■□□□□ 0.55
TMED1-203ENST00000588259 TMEM119Q4V9L6 283 aa18.47■□□□□ 0.55
TMED1-203ENST00000588259 ARL6IP4Q66PJ3 421 aaKnown RBP18.47■□□□□ 0.55
TMED1-203ENST00000588259 ELMOD1Q8N336 334 aa18.47■□□□□ 0.55
TMED1-203ENST00000588259 APPL2Q8NEU8 664 aa18.47■□□□□ 0.55
TMED1-203ENST00000588259 KIF12Q96FN5 646 aa18.47■□□□□ 0.55
TMED1-203ENST00000588259 SUSD3Q96L08 255 aa18.47■□□□□ 0.55
TMED1-203ENST00000588259 NTPCRQ9BSD7 190 aaKnown RBP18.47■□□□□ 0.55
TMED1-203ENST00000588259 INSL5Q9Y5Q6 135 aa18.47■□□□□ 0.55
TMED1-203ENST00000588259 CACNA1IQ9P0X4 2223 aa18.46■□□□□ 0.55
TMED1-203ENST00000588259 ARHGEF37A1IGU5 675 aa18.46■□□□□ 0.55
TMED1-203ENST00000588259 K7ENM7 598 aa18.46■□□□□ 0.55
TMED1-203ENST00000588259 HNRNPDLO14979 420 aaKnown RBP18.46■□□□□ 0.55
TMED1-203ENST00000588259 MEFVO15553 781 aaPredicted RBP18.46■□□□□ 0.55
TMED1-203ENST00000588259 LRRN2O75325 713 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms