RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	ANKRD13A	Q8IZ07	590 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	LENG1	Q96BZ8	264 aa	Predicted RBP	10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	PPP1R14B	Q96C90	147 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	COL4A3BP	Q9Y5P4	624 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	PFAS	O15067	1338 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077		A0A0J9YVX5	310 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	KIAA0391	O15091	583 aa	Known RBP	10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	TBC1D12	O60347	775 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ZCCHC18	P0CG32	403 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CCNB1	P14635	433 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	RASA1	P20936	1047 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CAP2	P40123	477 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ARPC4	P59998	168 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	GABPA	Q06546	454 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	LSAMP	Q13449	338 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	KIAA1755	Q5JYT7	1200 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	TTC30A	Q86WT1	665 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	DTX3L	Q8TDB6	740 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	U2AF1L4	Q8WU68	220 aa	Known RBP	10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SREK1	Q8WXA9	508 aa	Known RBP	10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	KLRG1	Q96E93	195 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	NUDT12	Q9BQG2	462 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	TBC1D10A	Q9BXI6	508 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	GRHL1	Q9NZI5	618 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	AJAP1	Q9UKB5	411 aa	Predicted RBP	10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	LAMB1	P07942	1786 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	TMEM88B	A6NKF7	163 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	RIPK2	O43353	540 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ATP9A	O75110	1047 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ASNS	P08243	561 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ITGA2B	P08514	1039 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	IDO1	P14902	403 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	VARS	P26640	1264 aa	Known RBP	10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ADAR	P55265	1226 aa	Known RBP	10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SH3BGR	P55822	239 aa	Predicted RBP	10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	EXOC3L4	Q17RC7	722 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CST9	Q5W186	159 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	INTS8	Q75QN2	995 aa	Known RBP	10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SV2B	Q7L1I2	683 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	KCNK18	Q7Z418	384 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	IRF2BP2	Q7Z5L9	587 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	PEX5L	Q8IYB4	626 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	RASGEF1C	Q8N431	466 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	GJA10	Q969M2	543 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	RAB3IP	Q96QF0	476 aa	Predicted RBP	10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CUEDC2	Q9H467	287 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	BLOC1S4	Q9NUP1	217 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	PRKAG3	Q9UGI9	489 aa		10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	BAZ2A	Q9UIF9	1905 aa	Known RBP	10.07	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	IGSF9B	Q9UPX0	1349 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CES2	O00748	559 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	NVL	O15381	856 aa	Known RBP	10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	OR52Z1	P0C646	297 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	GSTM4	Q03013	218 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ZYX	Q15942	572 aa	Known RBP	10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	KHDC1	Q4VXA5	237 aa	Known RBP	10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CLEC10A	Q8IUN9	316 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	PDCD7	Q8N8D1	485 aa	Known RBP	10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	FAM136A	Q96C01	138 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	OTUD5	Q96G74	571 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CATSPER2	Q96P56	530 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	POP1	Q99575	1024 aa	Known RBP	10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	PDP2	Q9P2J9	529 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	STXBP5L	Q9Y2K9	1186 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ZHX2	Q9Y6X8	837 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	COMMD3-BMI1	R4GMX3	469 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	POTEM	A6NI47	508 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	BOLA2-SMG1P6	H3BVE0	249 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	STX2	P32856	288 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	KCNJ1	P48048	391 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ZNF157	P51786	506 aa	Predicted RBP	10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	PTEN	P60484	403 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	NSUN2	Q08J23	767 aa	Known RBP eCLIP	10.06	□□□□□ -0.8	1e-30	■■■■■ 106.9
CACNA2D4-223	ENST00000588077	GRB10	Q13322	594 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	VGLL4	Q14135	290 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CCDC6	Q16204	474 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	RFX8	Q6ZV50	586 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SCYL3	Q8IZE3	742 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	NRG4	Q8WWG1	115 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ATP6V0A1	Q93050	837 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	BHMT	Q93088	406 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SPATA16	Q9BXB7	569 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	MIS12	Q9H081	205 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	GAN	Q9H2C0	597 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ZBTB21	Q9ULJ3	1066 aa		10.06	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	ASL	P04424	464 aa		10.05	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SKI	P12755	728 aa		10.05	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SMARCA1	P28370	1054 aa		10.05	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	FOXN2	P32314	431 aa		10.05	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	CD97	P48960	835 aa		10.05	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	FKBP1B	P68106	108 aa		10.05	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SLC35G1	Q2M3R5	365 aa		10.05	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	USH1G	Q495M9	461 aa		10.05	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	TATDN1	Q6P1N9	297 aa		10.05	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	TMEM179	Q6ZVK1	233 aa		10.05	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	TAOK1	Q7L7X3	1001 aa		10.05	□□□□□ -0.8
CACNA2D4-223	ENST00000588077	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	10.05	□□□□□ -0.8	4e-6	■□□□□ 8.2

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