RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 AK8Q96MA6 479 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 REEP2Q9BRK0 252 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 IRF2BPLQ9H1B7 796 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 BLOC1S4Q9NUP1 217 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 KCND2Q9NZV8 630 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 DNMT3BQ9UBC3 853 aaKnown RBP15.67■□□□□ 0.1
VMP1-206ENST00000587945 WNT16Q9UBV4 365 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 TUBGCP4Q9UGJ1 667 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 NUB1Q9Y5A7 615 aa15.67■□□□□ 0.1
VMP1-206ENST00000587945 CXCL8P10145 99 aa15.66■□□□□ 0.1
VMP1-206ENST00000587945 PLCG1P19174 1290 aa15.66■□□□□ 0.1
VMP1-206ENST00000587945 RPL9P32969 192 aaKnown RBP15.66■□□□□ 0.1
VMP1-206ENST00000587945 NCKAP1LP55160 1127 aa15.66■□□□□ 0.1
VMP1-206ENST00000587945 ROR1Q01973 937 aa15.66■□□□□ 0.1
VMP1-206ENST00000587945 MCM6Q14566 821 aa15.66■□□□□ 0.1
VMP1-206ENST00000587945 KARSQ15046 597 aaKnown RBP15.66■□□□□ 0.1
VMP1-206ENST00000587945 SF3A1Q15459 793 aaKnown RBP15.66■□□□□ 0.1
VMP1-206ENST00000587945 UVSSAQ2YD98 709 aa15.66■□□□□ 0.1
VMP1-206ENST00000587945 ZBTB41Q5SVQ8 909 aa15.66■□□□□ 0.1
VMP1-206ENST00000587945 HAUS6Q7Z4H7 955 aa15.66■□□□□ 0.1
VMP1-206ENST00000587945 ING5Q8WYH8 240 aa15.66■□□□□ 0.1
VMP1-206ENST00000587945 CALML4Q96GE6 196 aa15.66■□□□□ 0.1
VMP1-206ENST00000587945 LARSQ9P2J5 1176 aaKnown RBP15.66■□□□□ 0.1
VMP1-206ENST00000587945 KCNG1Q9UIX4 513 aa15.66■□□□□ 0.1
VMP1-206ENST00000587945 WDR27A2RRH5 827 aa15.65■□□□□ 0.1
VMP1-206ENST00000587945 VPS37CA5D8V6 355 aaPredicted RBP15.65■□□□□ 0.1
VMP1-206ENST00000587945 SYN3O14994 580 aa15.65■□□□□ 0.1
VMP1-206ENST00000587945 TBC1D4O60343 1298 aa15.65■□□□□ 0.1
VMP1-206ENST00000587945 GFRA3O60609 400 aa15.65■□□□□ 0.1
VMP1-206ENST00000587945 FAM13AO94988 1023 aa15.65■□□□□ 0.1
VMP1-206ENST00000587945 MCM4P33991 863 aa15.65■□□□□ 0.1
VMP1-206ENST00000587945 TNFSF9P41273 254 aa15.65■□□□□ 0.1
VMP1-206ENST00000587945 PABPC1LQ4VXU2 614 aaKnown RBP15.65■□□□□ 0.1
VMP1-206ENST00000587945 SLC8B1Q6J4K2 584 aa15.65■□□□□ 0.1
VMP1-206ENST00000587945 BRAPQ7Z569 592 aa15.65■□□□□ 0.1
VMP1-206ENST00000587945 MYCT1Q8N699 235 aa15.65■□□□□ 0.1
VMP1-206ENST00000587945 RASSF8Q8NHQ8 419 aa15.65■□□□□ 0.1
VMP1-206ENST00000587945 ZHX3Q9H4I2 956 aa15.65■□□□□ 0.1
VMP1-206ENST00000587945 TBC1D17Q9HA65 648 aa15.65■□□□□ 0.1
VMP1-206ENST00000587945 ODF2LQ9ULJ1 636 aa15.65■□□□□ 0.1
VMP1-206ENST00000587945 ZFP37Q9Y6Q3 630 aaPredicted RBP15.65■□□□□ 0.1
VMP1-206ENST00000587945 SLC26A4O43511 780 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 ABLIM3O94929 683 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 SEC24AO95486 1093 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 BMP15O95972 392 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 KRT18P05783 430 aaKnown RBP15.64■□□□□ 0.09
VMP1-206ENST00000587945 POU2F2P09086 479 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 CLTAP09496 248 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 RFX1P22670 979 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 ELF1P32519 619 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 LIG4P49917 911 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 GUCY2FP51841 1108 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 GPC5P78333 572 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 CUL4AQ13619 759 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 MRPL58Q14197 206 aaKnown RBP15.64■□□□□ 0.09
VMP1-206ENST00000587945 CTXN3Q4LDR2 81 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 SPECC1Q5M775 1068 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 NPAS3Q8IXF0 933 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 CCDC105Q8IYK2 499 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 DTWD2Q8NBA8 298 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 ZNF461Q8TAF7 563 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 RAD54LQ92698 747 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 KIF12Q96FN5 646 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 SUSD3Q96L08 255 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 RTP3Q9BQQ7 232 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 CYP4F11Q9HBI6 524 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 ARHGEF3Q9NR81 526 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 FBXL5Q9UKA1 691 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 TBX20Q9UMR3 447 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 CLIC4Q9Y696 253 aa15.64■□□□□ 0.09
VMP1-206ENST00000587945 TTC26A0AVF1 554 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 LACTBL1A8MY62 500 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 H0YCG3 227 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 H7C4K7 107 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 K7ENM7 598 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 PRRG1O14668 218 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 HNRNPDLO14979 420 aaKnown RBP15.63■□□□□ 0.09
VMP1-206ENST00000587945 RHOP08100 348 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 LONP1P36776 959 aaKnown RBP15.63■□□□□ 0.09
VMP1-206ENST00000587945 ENOX2Q16206 610 aaKnown RBP15.63■□□□□ 0.09
VMP1-206ENST00000587945 SLC5A9Q2M3M2 681 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 POTEHQ6S545 545 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 USP49Q70CQ1 688 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 RTL10Q7L3V2 364 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 DDX12PQ92771 950 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 MCRS1Q96EZ8 462 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 EPSTI1Q96J88 318 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 KXD1Q9BQD3 176 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 PLEKHA5Q9HAU0 1116 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 PARVGQ9HBI0 331 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 SLC2A4RGQ9NR83 387 aa15.63■□□□□ 0.09
VMP1-206ENST00000587945 MRPS23Q9Y3D9 190 aaKnown RBP15.63■□□□□ 0.09
VMP1-206ENST00000587945 TIMM13Q9Y5L4 95 aaPredicted RBP15.63■□□□□ 0.09
VMP1-206ENST00000587945 ARHGEF37A1IGU5 675 aa15.62■□□□□ 0.09
VMP1-206ENST00000587945 TRAK2O60296 914 aa15.62■□□□□ 0.09
VMP1-206ENST00000587945 FAM189A1O60320 539 aa15.62■□□□□ 0.09
VMP1-206ENST00000587945 LRG1P02750 347 aa15.62■□□□□ 0.09
VMP1-206ENST00000587945 DCNP07585 359 aaKnown RBP15.62■□□□□ 0.09
VMP1-206ENST00000587945 ATF2P15336 505 aa15.62■□□□□ 0.09
VMP1-206ENST00000587945 MARCKSP29966 332 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms