RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 WNT7BP56706 349 aa20.74■□□□□ 0.91
DDX39A-204ENST00000586558 TFAMQ00059 246 aaKnown RBP20.74■□□□□ 0.91
DDX39A-204ENST00000586558 STX1AQ16623 288 aa20.74■□□□□ 0.91
DDX39A-204ENST00000586558 DDX53Q86TM3 631 aaKnown RBP20.74■□□□□ 0.91
DDX39A-204ENST00000586558 TMEM173Q86WV6 379 aaPredicted RBP20.74■□□□□ 0.91
DDX39A-204ENST00000586558 CSGALNACT2Q8N6G5 542 aa20.74■□□□□ 0.91
DDX39A-204ENST00000586558 SPPL3Q8TCT6 385 aa20.74■□□□□ 0.91
DDX39A-204ENST00000586558 PARD3BQ8TEW8 1205 aa20.74■□□□□ 0.91
DDX39A-204ENST00000586558 GDPD5Q8WTR4 605 aa20.74■□□□□ 0.91
DDX39A-204ENST00000586558 CCDC127Q96BQ5 260 aa20.74■□□□□ 0.91
DDX39A-204ENST00000586558 CGRRF1Q99675 332 aa20.74■□□□□ 0.91
DDX39A-204ENST00000586558 DUSP9Q99956 384 aaKnown RBP20.74■□□□□ 0.91
DDX39A-204ENST00000586558 PAAF1Q9BRP4 392 aa20.74■□□□□ 0.91
DDX39A-204ENST00000586558 INTS13Q9NVM9 706 aa20.74■□□□□ 0.91
DDX39A-204ENST00000586558 MARCH5Q9NX47 278 aa20.74■□□□□ 0.91
DDX39A-204ENST00000586558 ADAM28Q9UKQ2 775 aa20.74■□□□□ 0.91
DDX39A-204ENST00000586558 PODXLO00592 558 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 KIF4AO95239 1232 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 FGFR1OPO95684 399 aaKnown RBP20.73■□□□□ 0.91
DDX39A-204ENST00000586558 TMEM191BP0C7N4 346 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 DLATP10515 647 aaKnown RBP20.73■□□□□ 0.91
DDX39A-204ENST00000586558 KRT13P13646 458 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 PAX3P23760 479 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 CLCNKBP51801 687 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 AP3M2P53677 418 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 CLDN10P78369 228 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 PTPROQ16827 1216 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 DUOXA2Q1HG44 320 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 Q7L0L9 218 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 BCL7CQ8WUZ0 217 aaPredicted RBP20.73■□□□□ 0.91
DDX39A-204ENST00000586558 ANKRD36BP1Q96IX9 119 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 FAM161BQ96MY7 647 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 ALG13Q9NP73 1137 aaKnown RBP20.73■□□□□ 0.91
DDX39A-204ENST00000586558 DPP3Q9NY33 737 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 LMCD1Q9NZU5 365 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 ITGA11Q9UKX5 1188 aa20.73■□□□□ 0.91
DDX39A-204ENST00000586558 SF3B1O75533 1304 aaKnown RBP eCLIP20.73■□□□□ 0.912e-6■■■■■ 37.2
DDX39A-204ENST00000586558 PDCD11Q14690 1871 aaKnown RBP20.73■□□□□ 0.91
DDX39A-204ENST00000586558 GRM6O15303 877 aa20.72■□□□□ 0.91
DDX39A-204ENST00000586558 LPXNO60711 386 aa20.72■□□□□ 0.91
DDX39A-204ENST00000586558 TADA2AO75478 443 aa20.72■□□□□ 0.91
DDX39A-204ENST00000586558 B3GAT3O94766 335 aa20.72■□□□□ 0.91
DDX39A-204ENST00000586558 TNNC2P02585 160 aa20.72■□□□□ 0.91
DDX39A-204ENST00000586558 TNNI1P19237 187 aa20.72■□□□□ 0.91
DDX39A-204ENST00000586558 STX17P56962 302 aa20.72■□□□□ 0.91
DDX39A-204ENST00000586558 MCCD1P59942 119 aaPredicted RBP20.72■□□□□ 0.91
DDX39A-204ENST00000586558 ELAVL2Q12926 359 aaKnown RBP20.72■□□□□ 0.91
DDX39A-204ENST00000586558 FILIP1Q7Z7B0 1213 aa20.72■□□□□ 0.91
DDX39A-204ENST00000586558 GAS2L1Q99501 681 aaPredicted RBP20.72■□□□□ 0.91
DDX39A-204ENST00000586558 GZF1Q9H116 711 aaPredicted RBP20.72■□□□□ 0.91
DDX39A-204ENST00000586558 MTMR10Q9NXD2 777 aa20.72■□□□□ 0.91
DDX39A-204ENST00000586558 CACNG4Q9UBN1 327 aa20.72■□□□□ 0.91
DDX39A-204ENST00000586558 CHD7Q9P2D1 2997 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 ANO9A1A5B4 782 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 TULP1O00294 542 aaPredicted RBP20.71■□□□□ 0.91
DDX39A-204ENST00000586558 IKBKBO14920 756 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 TRAPPC3O43617 180 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 GNA14O95837 355 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 EFEMP2O95967 443 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 POU3F3P20264 500 aaPredicted RBP20.71■□□□□ 0.91
DDX39A-204ENST00000586558 VAMP7P51809 220 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 TYRO3Q06418 890 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 BFSP1Q12934 665 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 C9orf57Q5W0N0 161 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 PDE12Q6L8Q7 609 aaKnown RBP20.71■□□□□ 0.91
DDX39A-204ENST00000586558 POF1BQ8WVV4 589 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 RABGGTAQ92696 567 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 MRPL38Q96DV4 380 aaKnown RBP20.71■□□□□ 0.91
DDX39A-204ENST00000586558 EEF2KMTQ96G04 330 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 BORCS6Q96GS4 357 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 MTMR12Q9C0I1 747 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 METTL14Q9HCE5 456 aaKnown RBP20.71■□□□□ 0.91
DDX39A-204ENST00000586558 TLR9Q9NR96 1032 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 PTPRJQ12913 1337 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 ANK1P16157 1881 aa20.71■□□□□ 0.91
DDX39A-204ENST00000586558 COL4A4P53420 1690 aaPredicted RBP20.7■□□□□ 0.91
DDX39A-204ENST00000586558 LRRIQ3A6PVS8 624 aaPredicted RBP20.7■□□□□ 0.9
DDX39A-204ENST00000586558 F8W810 466 aa20.7■□□□□ 0.9
DDX39A-204ENST00000586558 RFXAPO00287 272 aa20.7■□□□□ 0.9
DDX39A-204ENST00000586558 GUCY2FP51841 1108 aa20.7■□□□□ 0.9
DDX39A-204ENST00000586558 BMS1Q14692 1282 aaKnown RBP20.7■□□□□ 0.9
DDX39A-204ENST00000586558 FUT10Q6P4F1 479 aa20.7■□□□□ 0.9
DDX39A-204ENST00000586558 RNF168Q8IYW5 571 aaPredicted RBP20.7■□□□□ 0.9
DDX39A-204ENST00000586558 C1orf127Q8N9H9 656 aa20.7■□□□□ 0.9
DDX39A-204ENST00000586558 OR5B17Q8NGF7 314 aa20.7■□□□□ 0.9
DDX39A-204ENST00000586558 PLEKHO2Q8TD55 490 aa20.7■□□□□ 0.9
DDX39A-204ENST00000586558 CDX2Q99626 313 aaPredicted RBP20.7■□□□□ 0.9
DDX39A-204ENST00000586558 ARMCX3Q9UH62 379 aaPredicted RBP20.7■□□□□ 0.9
DDX39A-204ENST00000586558 NUB1Q9Y5A7 615 aa20.7■□□□□ 0.9
DDX39A-204ENST00000586558 TRIP11Q15643 1979 aa20.7■□□□□ 0.9
DDX39A-204ENST00000586558 PIRO00625 290 aa20.69■□□□□ 0.9
DDX39A-204ENST00000586558 STX10O60499 249 aa20.69■□□□□ 0.9
DDX39A-204ENST00000586558 SOD2P04179 222 aa20.69■□□□□ 0.9
DDX39A-204ENST00000586558 CCDC192P0DO97 292 aa20.69■□□□□ 0.9
DDX39A-204ENST00000586558 PNPLA4P41247 253 aa20.69■□□□□ 0.9
DDX39A-204ENST00000586558 LMBRD2Q68DH5 695 aaPredicted RBP20.69■□□□□ 0.9
DDX39A-204ENST00000586558 FRMD5Q7Z6J6 570 aa20.69■□□□□ 0.9
DDX39A-204ENST00000586558 GPR65Q8IYL9 337 aa20.69■□□□□ 0.9
DDX39A-204ENST00000586558 VPS52Q8N1B4 723 aa20.69■□□□□ 0.9
DDX39A-204ENST00000586558 LRRC52Q8N7C0 313 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms