RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ANKS3Q6ZW76 656 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 DAW1Q8N136 415 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 C4orf32Q8N8J7 132 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 ELSPBP1Q96BH3 223 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 ZSWIM3Q96MP5 696 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 ADPGKQ9BRR6 497 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 CDT1Q9H211 546 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 TNFSF13BQ9Y275 285 aa13.07□□□□□ -0.32
BRCA1-225ENST00000586385 EPG5Q9HCE0 2579 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 TPRP12270 2363 aaKnown RBP13.06□□□□□ -0.32
BRCA1-225ENST00000586385 MIA3Q5JRA6 1907 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 OR52Z1P0C646 297 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 ATXN1P54253 815 aaKnown RBP13.06□□□□□ -0.32
BRCA1-225ENST00000586385 ANAPC15P60006 121 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 ADCY1Q08828 1119 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 ANKRD1Q15327 319 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 ZNF852Q6ZMS4 543 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 MAP4K3Q8IVH8 894 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 TCEAL8Q8IYN2 117 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 HS6ST3Q8IZP7 471 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 ATRIPQ8WXE1 791 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 C18orf25Q96B23 403 aaPredicted RBP13.06□□□□□ -0.32
BRCA1-225ENST00000586385 UROC1Q96N76 676 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 ASB16Q96NS5 453 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 ACO2Q99798 780 aaKnown RBP13.06□□□□□ -0.32
BRCA1-225ENST00000586385 CORO1BQ9BR76 489 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 BHMT2Q9H2M3 363 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 CHRDQ9H2X0 955 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 NCDNQ9UBB6 729 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 FBXL5Q9UKA1 691 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 INSL5Q9Y5Q6 135 aa13.06□□□□□ -0.32
BRCA1-225ENST00000586385 COL4A2P08572 1712 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 PODXLO00592 558 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 VNN2O95498 520 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 ATF2P15336 505 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 KCNE1P15382 129 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 PTPN2P17706 415 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 PROZP22891 400 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 EFNA5P52803 228 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 OSTNP61366 133 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 GAS6Q14393 721 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 PPP2R5AQ15172 486 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 WDR44Q5JSH3 913 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 VITQ6UXI7 678 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 DNASE1L2Q92874 299 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 BORCS6Q96GS4 357 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 CNTNAP3BQ96NU0 1288 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 NELL2Q99435 816 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 TARS2Q9BW92 718 aaKnown RBP13.05□□□□□ -0.32
BRCA1-225ENST00000586385 CNTNAP3Q9BZ76 1288 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 CEP72Q9P209 647 aa13.05□□□□□ -0.32
BRCA1-225ENST00000586385 CACNA1BQ00975 2339 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 ARNTLO00327 626 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 PRRG1O14668 218 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 TRAPPC3O43617 180 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 MICAL2O94851 1124 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 GJA1P17302 382 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 VIPR2P41587 438 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 NPTX2P47972 431 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 ARPP19P56211 112 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 MAPK7Q13164 816 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 NBR1Q14596 966 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 MAMSTRQ6ZN01 415 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 KIFAP3Q92845 792 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 RSPRY1Q96DX4 576 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 CYP4F11Q9HBI6 524 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 ZNF334Q9HCZ1 680 aaPredicted RBP13.04□□□□□ -0.32
BRCA1-225ENST00000586385 ARHGAP28Q9P2N2 729 aa13.04□□□□□ -0.32
BRCA1-225ENST00000586385 NDRG2Q9UN36 371 aaKnown RBP13.04□□□□□ -0.32
BRCA1-225ENST00000586385 K7ERI5 159 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 SYN3O14994 580 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 KRT37O76014 449 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 LRG1P02750 347 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 MUTP22033 750 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 HOXC13P31276 330 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 CCT6AP40227 531 aaKnown RBP13.03□□□□□ -0.32
BRCA1-225ENST00000586385 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.32
BRCA1-225ENST00000586385 EPHA5P54756 1037 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 PEX3P56589 373 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 ZNF568Q3ZCX4 644 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 KCNK18Q7Z418 384 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 ERMNQ8TAM6 284 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 ZBTB45Q96K62 511 aaPredicted RBP13.03□□□□□ -0.32
BRCA1-225ENST00000586385 SUSD3Q96L08 255 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 IFT74Q96LB3 600 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 RUSC1Q9BVN2 902 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 TRMT61BQ9BVS5 477 aaKnown RBP13.03□□□□□ -0.32
BRCA1-225ENST00000586385 LRRC3Q9BY71 257 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 BRD9Q9H8M2 597 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 ZFP14Q9HCL3 533 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 CNTN3Q9P232 1028 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 KIAA1024Q9UPX6 916 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 PHLPP2Q6ZVD8 1323 aa13.03□□□□□ -0.32
BRCA1-225ENST00000586385 ACACBO00763 2458 aa13.02□□□□□ -0.32
BRCA1-225ENST00000586385 DCDC2BA2VCK2 349 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 PP2D1A8MPX8 630 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 E9PMD0 336 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 NCAM2O15394 837 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 CHRNB1P11230 501 aa13.02□□□□□ -0.33
BRCA1-225ENST00000586385 GDI1P31150 447 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms