RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 LRWD1Q9UFC0 647 aa12.76□□□□□ -0.37
LIG3-207ENST00000586119 PCDHB6Q9Y5E3 794 aa12.76□□□□□ -0.37
LIG3-207ENST00000586119 PODXLO00592 558 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 HIP1RO75146 1068 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 ABLIM3O94929 683 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 HARSP12081 509 aaKnown RBP12.75□□□□□ -0.37
LIG3-207ENST00000586119 FXR2P51116 673 aaKnown RBP eCLIP12.75□□□□□ -0.374e-6■■■■□ 19.6
LIG3-207ENST00000586119 EFNA5P52803 228 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 PRKCQQ04759 706 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 SPAG1Q07617 926 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 MAPK7Q13164 816 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 PTGDRQ13258 359 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 PDCD11Q14690 1871 aaKnown RBP12.75□□□□□ -0.37
LIG3-207ENST00000586119 PRSS36Q5K4E3 855 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 PDXDC1Q6P996 788 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 TPRG1Q6ZUI0 275 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 ANKS3Q6ZW76 656 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 ERMP1Q7Z2K6 904 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 GPIHBP1Q8IV16 184 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 FBXO18Q8NFZ0 1043 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 ZNF461Q8TAF7 563 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 SNX29Q8TEQ0 813 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 KIFAP3Q92845 792 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 CORO1BQ9BR76 489 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 BCO2Q9BYV7 579 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 KCNH3Q9ULD8 1083 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 LIMCH1Q9UPQ0 1083 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 FRYLO94915 3013 aa12.75□□□□□ -0.37
LIG3-207ENST00000586119 CEP250Q9BV73 2442 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 ARHGEF37A1IGU5 675 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 SLC16A4O15374 487 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 LAMTOR5O43504 91 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 MOSPD3O75425 235 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 POU2F2P09086 479 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 PTPN2P17706 415 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 FCARP24071 287 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 RAD51AP2Q09MP3 1159 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 MRPL58Q14197 206 aaKnown RBP12.74□□□□□ -0.37
LIG3-207ENST00000586119 ZNF568Q3ZCX4 644 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 FAM78AQ5JUQ0 283 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 SLC8B1Q6J4K2 584 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 RINT1Q6NUQ1 792 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 C1orf186Q6ZWK4 172 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 UROC1Q96N76 676 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 PLIN2Q99541 437 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 MMTAG2Q9BU76 263 aaKnown RBP12.74□□□□□ -0.37
LIG3-207ENST00000586119 CCDC94Q9BW85 323 aaPredicted RBP12.74□□□□□ -0.37
LIG3-207ENST00000586119 TMEM134Q9H6X4 195 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 CYP4F11Q9HBI6 524 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 FBXL5Q9UKA1 691 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 DNAH14Q0VDD8 3507 aa12.74□□□□□ -0.37
LIG3-207ENST00000586119 NCANO14594 1321 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 TICRRQ7Z2Z1 1910 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 PRRG1O14668 218 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 ECI2O75521 394 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 MUTP22033 750 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 PROZP22891 400 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 ELF1P32519 619 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 VIPR2P41587 438 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 YARSP54577 528 aaKnown RBP12.73□□□□□ -0.37
LIG3-207ENST00000586119 PDIA5Q14554 519 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 SLC10A6Q3KNW5 377 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 ZBTB41Q5SVQ8 909 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 HAUS3Q68CZ6 603 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 IGSF22Q8N9C0 903 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 RUBCNQ92622 972 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 CLDN23Q96B33 292 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 ACAP3Q96P50 834 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 TCHPQ9BT92 498 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 HAPLN2Q9GZV7 340 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 UPF2Q9HAU5 1272 aaKnown RBP12.73□□□□□ -0.37
LIG3-207ENST00000586119 KMT5AQ9NQR1 393 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 CEP72Q9P209 647 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 ARHGAP28Q9P2N2 729 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 TIMM13Q9Y5L4 95 aaPredicted RBP12.73□□□□□ -0.37
LIG3-207ENST00000586119 ANK1P16157 1881 aa12.73□□□□□ -0.37
LIG3-207ENST00000586119 PHLPP2Q6ZVD8 1323 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 NPHP3-ACAD11A0A0J9YXS1 232 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 TRAPPC3O43617 180 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 KINO60870 393 aaKnown RBP12.72□□□□□ -0.37
LIG3-207ENST00000586119 VNN2O95498 520 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 LRG1P02750 347 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 OR4Q2P0C623 313 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 ATF2P15336 505 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 KCNE1P15382 129 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 HOXC13P31276 330 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 CDR1P51861 262 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 PFKPQ01813 784 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 CACNB1Q02641 598 aaPredicted RBP12.72□□□□□ -0.37
LIG3-207ENST00000586119 ADCY1Q08828 1119 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 ZRSR1Q15695 479 aaKnown RBP12.72□□□□□ -0.37
LIG3-207ENST00000586119 RSPO4Q2I0M5 234 aaPredicted RBP12.72□□□□□ -0.37
LIG3-207ENST00000586119 CTXN3Q4LDR2 81 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 ZC3H14Q6PJT7 736 aaKnown RBP12.72□□□□□ -0.37
LIG3-207ENST00000586119 RNF19BQ6ZMZ0 732 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 DGLUCYQ7Z3D6 616 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 ZNF687Q8N1G0 1237 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 DDX12PQ92771 950 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 TBC1D32Q96NH3 1257 aa12.72□□□□□ -0.37
LIG3-207ENST00000586119 PNMA5Q96PV4 448 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms