RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ALKAL1Q6UXT8 129 aa13.68□□□□□ -0.22
VMP1-202ENST00000585847 CCDC186Q7Z3E2 898 aa13.68□□□□□ -0.22
VMP1-202ENST00000585847 THNSL1Q8IYQ7 743 aa13.68□□□□□ -0.22
VMP1-202ENST00000585847 SLC35C1Q96A29 364 aa13.68□□□□□ -0.22
VMP1-202ENST00000585847 SAAL1Q96ER3 474 aa13.68□□□□□ -0.22
VMP1-202ENST00000585847 ADPGKQ9BRR6 497 aa13.68□□□□□ -0.22
VMP1-202ENST00000585847 APOL6Q9BWW8 343 aa13.68□□□□□ -0.22
VMP1-202ENST00000585847 HCSTQ9UBK5 93 aa13.68□□□□□ -0.22
VMP1-202ENST00000585847 CPSF3Q9UKF6 684 aaKnown RBP13.68□□□□□ -0.22
VMP1-202ENST00000585847 AGO2Q9UKV8 859 aaKnown RBP13.68□□□□□ -0.22
VMP1-202ENST00000585847 GOLGA8IPA6NC78 632 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 ZNF233A6NK53 670 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 GOLGA8JA6NMD2 632 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 B4GALT3O60512 393 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 STAG3L1P0CL83 205 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 ITGA4P13612 1032 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 MYOGP15173 224 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 ANXA13P27216 316 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 ACOT2P49753 483 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 CYP2J2P51589 502 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 OSTNP61366 133 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 ZBED6P86452 979 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 SLC10A6Q3KNW5 377 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 GBP6Q6ZN66 633 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 CREBRFQ8IUR6 639 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 LRRC8AQ8IWT6 810 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 TMEM130Q8N3G9 435 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 SPC24Q8NBT2 197 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 NEK11Q8NG66 645 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 HELQQ8TDG4 1101 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 PPM1EQ8WY54 764 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 SYN2Q92777 582 aaPredicted RBP13.67□□□□□ -0.22
VMP1-202ENST00000585847 ZFP42Q96MM3 310 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 TSPAN18Q96SJ8 248 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 TCHPQ9BT92 498 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 MSTO1Q9BUK6 570 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 ZNHIT6Q9NWK9 470 aaKnown RBP13.67□□□□□ -0.22
VMP1-202ENST00000585847 KLK14Q9P0G3 267 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 CAPN11Q9UMQ6 739 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 PLAGL2Q9UPG8 496 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 GIT1Q9Y2X7 761 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 LUC7L2Q9Y383 392 aaKnown RBP13.67□□□□□ -0.22
VMP1-202ENST00000585847 PCDHB7Q9Y5E2 793 aa13.67□□□□□ -0.22
VMP1-202ENST00000585847 TTC26A0AVF1 554 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 LCHNA4D1U4 455 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 TNFRSF10AO00220 468 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 PTGESO14684 152 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 ARHGAP6O43182 974 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 FECHP22830 423 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 PBX2P40425 430 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 CASP4P49662 377 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 CDK17Q00537 523 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 KCNH2Q12809 1159 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 SYCP1Q15431 976 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 ENOX2Q16206 610 aaKnown RBP13.66□□□□□ -0.22
VMP1-202ENST00000585847 CBWD2Q8IUF1 395 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 TXLNBQ8N3L3 684 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 RNF169Q8NCN4 708 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 PLEKHO2Q8TD55 490 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 SP7Q8TDD2 431 aaPredicted RBP13.66□□□□□ -0.22
VMP1-202ENST00000585847 PGBD4Q96DM1 585 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 SNX27Q96L92 541 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 MFSD14AQ96MC6 490 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 ZMAT2Q96NC0 199 aaKnown RBP13.66□□□□□ -0.22
VMP1-202ENST00000585847 GAD1Q99259 594 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 TRIM6Q9C030 488 aaPredicted RBP13.66□□□□□ -0.22
VMP1-202ENST00000585847 MTIF3Q9H2K0 278 aaKnown RBP13.66□□□□□ -0.22
VMP1-202ENST00000585847 RSAD1Q9HA92 442 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 CEP72Q9P209 647 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 SIK3Q9Y2K2 1263 aa13.66□□□□□ -0.22
VMP1-202ENST00000585847 YBX2Q9Y2T7 364 aaKnown RBP13.66□□□□□ -0.22
VMP1-202ENST00000585847 NLRC5Q86WI3 1866 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 GOLGA6L9A6NEM1 432 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 TEX33O43247 280 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 ZC3H11AO75152 810 aaKnown RBP eCLIP13.65□□□□□ -0.22
VMP1-202ENST00000585847 CLTAP09496 248 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 CCDC172P0C7W6 258 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 CXCL8P10145 99 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 MLH1P40692 756 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 MATR3P43243 847 aaKnown RBP eCLIP13.65□□□□□ -0.22
VMP1-202ENST00000585847 VAMP7P51809 220 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 CLDN10P78369 228 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 PSMD6Q15008 389 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 NAB2Q15742 525 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 EXOC3L4Q17RC7 722 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 DCAF17Q5H9S7 520 aaPredicted RBP13.65□□□□□ -0.22
VMP1-202ENST00000585847 TCERG1LQ5VWI1 586 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 SPRED2Q7Z698 418 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 NT5DC4Q86YG4 428 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 BRSK2Q8IWQ3 736 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 CD302Q8IX05 232 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 OR8K1Q8NGG5 319 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 PCMTD1Q96MG8 357 aaPredicted RBP13.65□□□□□ -0.22
VMP1-202ENST00000585847 ACAP3Q96P50 834 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 DNAJC7Q99615 494 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 FAM213AQ9BRX8 229 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 TTYH3Q9C0H2 523 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 TMEM117Q9H0C3 514 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 CWH43Q9H720 699 aa13.65□□□□□ -0.22
VMP1-202ENST00000585847 KCND1Q9NSA2 647 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms