RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 NRP1O14786 923 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 IKBKBO14920 756 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 PHACTR2O75167 634 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 PAX3P23760 479 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 LRPAP1P30533 357 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 MYL5Q02045 173 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 NAB2Q15742 525 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 EPC2Q52LR7 807 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 TCERG1LQ5VWI1 586 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 DCLRE1AQ6PJP8 1040 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 C11orf57Q6ZUT1 292 aaPredicted RBP15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 EFCAB13Q8IY85 973 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 BPIFA3Q9BQP9 254 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 C17orf80Q9BSJ5 609 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 ANP32EQ9BTT0 268 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 MTMR12Q9C0I1 747 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 ZNF576Q9H609 170 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 PUF60Q9UHX1 559 aaKnown RBP15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 PDCD11Q14690 1871 aaKnown RBP15.77■□□□□ 0.11
SCAMP4-209ENST00000585335 LRRIQ3A6PVS8 624 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 C5orf67F2Z3F1 127 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 TRAPPC3O43617 180 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 TADA2AO75478 443 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 B3GAT3O94766 335 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 GTF2H1P32780 548 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 PNPLA4P41247 253 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 ZNF165P49910 485 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 ELAVL2Q12926 359 aaKnown RBP15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 BIRC3Q13489 604 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 BMS1Q14692 1282 aaKnown RBP15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 UPP1Q16831 310 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 DCAF17Q5H9S7 520 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 GPR153Q6NV75 609 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 CREBRFQ8IUR6 639 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 SLC39A11Q8N1S5 342 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 ANKRD20A12PQ8NF67 263 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 ARNTL2Q8WYA1 636 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 ZNF560Q96MR9 790 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 FUCA2Q9BTY2 467 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 GOLGA2P5Q9HBQ8 144 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 NFE2L3Q9Y4A8 694 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 NUB1Q9Y5A7 615 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 TRIP11Q15643 1979 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 TRIOBPQ9H2D6 2365 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 ANK1P16157 1881 aa15.76■□□□□ 0.11
SCAMP4-209ENST00000585335 SF3B1O75533 1304 aaKnown RBP eCLIP15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 ARHGEF37A1IGU5 675 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 BECN2A8MW95 431 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 NT5C1B-RDH14C9J2C7 533 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 TMEM189-UBE2V1I3L0A0 370 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 SOX1O00570 391 aaPredicted RBP15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 B4GALT3O60512 393 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 FGF18O76093 207 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 ARHGEF15O94989 841 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 TPM2P07951 284 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 KRT19P08727 400 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 LINC00271P0C7V0 271 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 PBX3P40426 434 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 MTIF2P46199 727 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 CLCNKBP51801 687 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 MARSP56192 900 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 WNT7BP56706 349 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 TPM4P67936 248 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 CLDN10P78369 228 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 RBP5P82980 135 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 PLCB3Q01970 1234 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 UBE3AQ05086 875 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 SOX4Q06945 474 aaPredicted RBP15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 TRPC3Q13507 836 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 C9orf57Q5W0N0 161 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 LMBRD2Q68DH5 695 aaPredicted RBP15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 KLHL23Q8NBE8 558 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 IGSF21Q96ID5 467 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 CNOT6LQ96LI5 555 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 POP1Q99575 1024 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 ADAM28Q9UKQ2 775 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 NLRC5Q86WI3 1866 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 KIAA1671Q9BY89 1806 aa15.75■□□□□ 0.11
SCAMP4-209ENST00000585335 N4BP1O75113 896 aaKnown RBP15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 CLSTN1O94985 981 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 KIF4AO95239 1232 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 ITGB3P05106 788 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 TRIM49P0CI25 452 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 TRIM49CP0CI26 452 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 GUCY2FP51841 1108 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 MYO1EQ12965 1108 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 GPM6BQ13491 265 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 LRSAM1Q6UWE0 723 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 TRAPPC11Q7Z392 1133 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 AOPEPQ8N6M6 819 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 LRRC52Q8N7C0 313 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 C1orf127Q8N9H9 656 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 OR5B17Q8NGF7 314 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 PLEKHO2Q8TD55 490 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 BORCS6Q96GS4 357 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 LRCH3Q96II8 777 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 TSPY26PQ9H489 355 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 CERS4Q9HA82 394 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 AGAP1Q9UPQ3 857 aa15.74■□□□□ 0.11
SCAMP4-209ENST00000585335 LZTS1Q9Y250 596 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms