RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 PTGDRQ13258 359 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 PTPAQ15257 358 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 SLC5A9Q2M3M2 681 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 FAM78AQ5JUQ0 283 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 TPGS2Q68CL5 300 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 CDCA2Q69YH5 1023 aaPredicted RBP9.31□□□□□ -0.92
SRSF1-207ENST00000584668 SLC8B1Q6J4K2 584 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 CDR2LQ86X02 465 aaPredicted RBP9.31□□□□□ -0.92
SRSF1-207ENST00000584668 SYNPOQ8N3V7 929 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 DEPTORQ8TB45 409 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 WASF1Q92558 559 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 EXOC4Q96A65 974 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 DDX27Q96GQ7 796 aaKnown RBP9.31□□□□□ -0.92
SRSF1-207ENST00000584668 EIF2AK1Q9BQI3 630 aaKnown RBP9.31□□□□□ -0.92
SRSF1-207ENST00000584668 AGXT2Q9BYV1 514 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 PLA2G2FQ9BZM2 168 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 NCOA5Q9HCD5 579 aaKnown RBP9.31□□□□□ -0.92
SRSF1-207ENST00000584668 XPNPEP1Q9NQW7 623 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 SH2B1Q9NRF2 756 aaPredicted RBP9.31□□□□□ -0.92
SRSF1-207ENST00000584668 CACNG4Q9UBN1 327 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 PCDHA12Q9UN75 941 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 INSL5Q9Y5Q6 135 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 NUP210Q8TEM1 1887 aaPredicted RBP9.31□□□□□ -0.92
SRSF1-207ENST00000584668 CNOT1A5YKK6 2376 aaKnown RBP9.31□□□□□ -0.92
SRSF1-207ENST00000584668 CITO14578 2027 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 PHLPP2Q6ZVD8 1323 aa9.31□□□□□ -0.92
SRSF1-207ENST00000584668 TRIP11Q15643 1979 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 WDR27A2RRH5 827 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 TMEM8BA6NDV4 472 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 CHURC1-FNTBB4DL54 471 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 DPYSL4O14531 572 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 PTGESO14684 152 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 ADAM12O43184 909 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 REC8O95072 547 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 FGF19O95750 216 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 PRKCBP05771 671 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 CCDC192P0DO97 292 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 CHRNB1P11230 501 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 XRCC6P12956 609 aaKnown RBP eCLIP9.3□□□□□ -0.92
SRSF1-207ENST00000584668 FCARP24071 287 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 CCNE1P24864 410 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 TKTP29401 623 aaKnown RBP9.3□□□□□ -0.92
SRSF1-207ENST00000584668 FNTBP49356 437 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 RARRES1P49788 294 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 CLCNKBP51801 687 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 FZD5Q13467 585 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 CALCRLQ16602 461 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 PRSS36Q5K4E3 855 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 ZNF280DQ6N043 979 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 VITQ6UXI7 678 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 PIK3AP1Q6ZUJ8 805 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 CACNA2D4Q7Z3S7 1137 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 WDR5BQ86VZ2 330 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 RALGPS2Q86X27 583 aaPredicted RBP9.3□□□□□ -0.92
SRSF1-207ENST00000584668 MAP4K3Q8IVH8 894 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 MFSD6LQ8IWD5 586 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 TCEAL8Q8IYN2 117 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 FAM160A2Q8N612 972 aaPredicted RBP9.3□□□□□ -0.92
SRSF1-207ENST00000584668 ZSCAN18Q8TBC5 510 aaPredicted RBP9.3□□□□□ -0.92
SRSF1-207ENST00000584668 IFT74Q96LB3 600 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 CCDC94Q9BW85 323 aaPredicted RBP9.3□□□□□ -0.92
SRSF1-207ENST00000584668 PDZD7Q9H5P4 517 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 TRPV4Q9HBA0 871 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 GDAQ9Y2T3 454 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 NUB1Q9Y5A7 615 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 PCDHGA5Q9Y5G8 931 aa9.3□□□□□ -0.92
SRSF1-207ENST00000584668 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.3□□□□□ -0.92
SRSF1-207ENST00000584668 ATRXP46100 2492 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 ACKR2O00590 384 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 CHADO15335 359 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 ATG13O75143 517 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 RPP40O75818 363 aaKnown RBP9.29□□□□□ -0.92
SRSF1-207ENST00000584668 SLITRK3O94933 977 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 PROS1P07225 676 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 ZNF806P0C7X5 589 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 CPA1P15085 419 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 CPB1P15086 417 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 LIG1P18858 919 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 ATP2B1P20020 1258 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 HOXA6P31267 233 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 HSPA4P34932 840 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 NAMPTP43490 491 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 EFNA5P52803 228 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 ARPP19P56211 112 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 EVCP57679 992 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 PLCB2Q00722 1185 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 ACAP1Q15027 740 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 KARSQ15046 597 aaKnown RBP9.29□□□□□ -0.92
SRSF1-207ENST00000584668 UPP1Q16831 310 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 ARHGAP29Q52LW3 1261 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 N4BP2L1Q5TBK1 243 aaPredicted RBP9.29□□□□□ -0.92
SRSF1-207ENST00000584668 HEATR6Q6AI08 1181 aaKnown RBP9.29□□□□□ -0.92
SRSF1-207ENST00000584668 NOSTRINQ8IVI9 506 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 ZNF687Q8N1G0 1237 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 APPL2Q8NEU8 664 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 HAS1Q92839 578 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 ZNF274Q96GC6 653 aaPredicted RBP9.29□□□□□ -0.92
SRSF1-207ENST00000584668 OXCT2Q9BYC2 517 aaPredicted RBP9.29□□□□□ -0.92
SRSF1-207ENST00000584668 FZD8Q9H461 694 aa9.29□□□□□ -0.92
SRSF1-207ENST00000584668 STK36Q9NRP7 1315 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms