RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CCDC65Q8IXS2 484 aa22.24■■□□□ 1.15
SS18-224ENST00000584083 FEZF2Q8TBJ5 459 aa22.24■■□□□ 1.15
SS18-224ENST00000584083 HDAC7Q8WUI4 952 aa22.24■■□□□ 1.15
SS18-224ENST00000584083 CLSTN3Q9BQT9 956 aa22.24■■□□□ 1.15
SS18-224ENST00000584083 TNMDQ9H2S6 317 aa22.24■■□□□ 1.15
SS18-224ENST00000584083 CUEDC2Q9H467 287 aa22.24■■□□□ 1.15
SS18-224ENST00000584083 PLEKHA4Q9H4M7 779 aa22.24■■□□□ 1.15
SS18-224ENST00000584083 FAM13BQ9NYF5 915 aa22.24■■□□□ 1.15
SS18-224ENST00000584083 TUBGCP4Q9UGJ1 667 aa22.24■■□□□ 1.15
SS18-224ENST00000584083 PCDHA7Q9UN72 937 aa22.24■■□□□ 1.15
SS18-224ENST00000584083 EXOC7Q9UPT5 735 aa22.24■■□□□ 1.15
SS18-224ENST00000584083 TISP43B9A030 160 aa22.23■■□□□ 1.15
SS18-224ENST00000584083 FAM189A1O60320 539 aa22.23■■□□□ 1.15
SS18-224ENST00000584083 PPP1R37O75864 691 aa22.23■■□□□ 1.15
SS18-224ENST00000584083 C1RP00736 705 aa22.23■■□□□ 1.15
SS18-224ENST00000584083 TKTP29401 623 aaKnown RBP22.23■■□□□ 1.15
SS18-224ENST00000584083 AMPD3Q01432 767 aa22.23■■□□□ 1.15
SS18-224ENST00000584083 E2F4Q16254 413 aa22.23■■□□□ 1.15
SS18-224ENST00000584083 LILRA6Q6PI73 481 aa22.23■■□□□ 1.15
SS18-224ENST00000584083 C15orf39Q6ZRI6 1047 aa22.23■■□□□ 1.15
SS18-224ENST00000584083 KREMEN2Q8NCW0 462 aa22.23■■□□□ 1.15
SS18-224ENST00000584083 ACCSQ96QU6 501 aa22.23■■□□□ 1.15
SS18-224ENST00000584083 IKZF4Q9H2S9 585 aa22.23■■□□□ 1.15
SS18-224ENST00000584083 OLFML3Q9NRN5 406 aa22.23■■□□□ 1.15
SS18-224ENST00000584083 AGO2Q9UKV8 859 aaKnown RBP22.23■■□□□ 1.15
SS18-224ENST00000584083 PCDHB13Q9Y5F0 798 aa22.23■■□□□ 1.15
SS18-224ENST00000584083 MYO10Q9HD67 2058 aa22.22■■□□□ 1.15
SS18-224ENST00000584083 POLR2DO15514 142 aaKnown RBP22.22■■□□□ 1.15
SS18-224ENST00000584083 XPOTO43592 962 aaKnown RBP22.22■■□□□ 1.15
SS18-224ENST00000584083 RFPL2O75678 378 aa22.22■■□□□ 1.15
SS18-224ENST00000584083 ACOT2P49753 483 aa22.22■■□□□ 1.15
SS18-224ENST00000584083 L1TD1Q5T7N2 865 aaKnown RBP22.22■■□□□ 1.15
SS18-224ENST00000584083 SYCP3Q8IZU3 236 aa22.22■■□□□ 1.15
SS18-224ENST00000584083 CMASQ8NFW8 434 aaPredicted RBP22.22■■□□□ 1.15
SS18-224ENST00000584083 POMGNT1Q8WZA1 660 aa22.22■■□□□ 1.15
SS18-224ENST00000584083 STRA6Q9BX79 667 aa22.22■■□□□ 1.15
SS18-224ENST00000584083 KBTBD4Q9NVX7 518 aa22.22■■□□□ 1.15
SS18-224ENST00000584083 CPSF3Q9UKF6 684 aaKnown RBP22.22■■□□□ 1.15
SS18-224ENST00000584083 RCOR1Q9UKL0 485 aa22.22■■□□□ 1.15
SS18-224ENST00000584083 UBQLN1Q9UMX0 589 aaKnown RBP22.22■■□□□ 1.15
SS18-224ENST00000584083 ANK1P16157 1881 aa22.22■■□□□ 1.15
SS18-224ENST00000584083 DENND4AQ7Z401 1863 aa22.22■■□□□ 1.15
SS18-224ENST00000584083 FRMD3A2A2Y4 597 aa22.21■■□□□ 1.15
SS18-224ENST00000584083 ADAM12O43184 909 aa22.21■■□□□ 1.15
SS18-224ENST00000584083 GPR37L1O60883 481 aa22.21■■□□□ 1.15
SS18-224ENST00000584083 MCM4P33991 863 aa22.21■■□□□ 1.15
SS18-224ENST00000584083 OR1D2P34982 312 aa22.21■■□□□ 1.15
SS18-224ENST00000584083 KCNA1Q09470 495 aa22.21■■□□□ 1.15
SS18-224ENST00000584083 ALCAMQ13740 583 aa22.21■■□□□ 1.15
SS18-224ENST00000584083 POSTNQ15063 836 aa22.21■■□□□ 1.15
SS18-224ENST00000584083 ANKS3Q6ZW76 656 aa22.21■■□□□ 1.15
SS18-224ENST00000584083 TDRD5Q8NAT2 981 aaKnown RBP22.21■■□□□ 1.15
SS18-224ENST00000584083 SMG7Q92540 1137 aaKnown RBP22.21■■□□□ 1.15
SS18-224ENST00000584083 LRFN3Q9BTN0 628 aa22.21■■□□□ 1.15
SS18-224ENST00000584083 PIDD1Q9HB75 910 aa22.21■■□□□ 1.15
SS18-224ENST00000584083 MTRRQ9UBK8 725 aa22.21■■□□□ 1.15
SS18-224ENST00000584083 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.21■■□□□ 1.15
SS18-224ENST00000584083 STYXL1Q9Y6J8 313 aa22.21■■□□□ 1.15
SS18-224ENST00000584083 TCHHQ07283 1943 aa22.2■■□□□ 1.14
SS18-224ENST00000584083 C2CD4DB7Z1M9 353 aa22.2■■□□□ 1.14
SS18-224ENST00000584083 CASP5P51878 434 aa22.2■■□□□ 1.14
SS18-224ENST00000584083 ASIC1P78348 528 aa22.2■■□□□ 1.14
SS18-224ENST00000584083 ZBTB6Q15916 424 aa22.2■■□□□ 1.14
SS18-224ENST00000584083 LIN9Q5TKA1 542 aa22.2■■□□□ 1.14
SS18-224ENST00000584083 CYP26C1Q6V0L0 522 aa22.2■■□□□ 1.14
SS18-224ENST00000584083 CCDC149Q6ZUS6 474 aa22.2■■□□□ 1.14
SS18-224ENST00000584083 CD302Q8IX05 232 aa22.2■■□□□ 1.14
SS18-224ENST00000584083 TMEM130Q8N3G9 435 aa22.2■■□□□ 1.14
SS18-224ENST00000584083 TSPAN18Q96SJ8 248 aa22.2■■□□□ 1.14
SS18-224ENST00000584083 TRIM9Q9C026 710 aa22.2■■□□□ 1.14
SS18-224ENST00000584083 C11orf16Q9NQ32 467 aa22.2■■□□□ 1.14
SS18-224ENST00000584083 ZDHHC9Q9Y397 364 aa22.2■■□□□ 1.14
SS18-224ENST00000584083 CDY1Q9Y6F8 540 aa22.2■■□□□ 1.14
SS18-224ENST00000584083 TULP1O00294 542 aaPredicted RBP22.19■■□□□ 1.14
SS18-224ENST00000584083 CYP3A5P20815 502 aa22.19■■□□□ 1.14
SS18-224ENST00000584083 RAB33AQ14088 237 aa22.19■■□□□ 1.14
SS18-224ENST00000584083 BECN1Q14457 450 aa22.19■■□□□ 1.14
SS18-224ENST00000584083 VARS2Q5ST30 1063 aaKnown RBP22.19■■□□□ 1.14
SS18-224ENST00000584083 RESP18Q5W5W9 173 aa22.19■■□□□ 1.14
SS18-224ENST00000584083 JADE1Q6IE81 842 aa22.19■■□□□ 1.14
SS18-224ENST00000584083 STXBP4Q6ZWJ1 553 aa22.19■■□□□ 1.14
SS18-224ENST00000584083 SUSD3Q96L08 255 aa22.19■■□□□ 1.14
SS18-224ENST00000584083 FGFBP2Q9BYJ0 223 aa22.19■■□□□ 1.14
SS18-224ENST00000584083 ZDHHC7Q9NXF8 308 aa22.19■■□□□ 1.14
SS18-224ENST00000584083 FBXW11Q9UKB1 542 aa22.19■■□□□ 1.14
SS18-224ENST00000584083 BACE2Q9Y5Z0 518 aa22.19■■□□□ 1.14
SS18-224ENST00000584083 SYN3O14994 580 aa22.18■■□□□ 1.14
SS18-224ENST00000584083 ZMYND10O75800 440 aa22.18■■□□□ 1.14
SS18-224ENST00000584083 PRPF6O94906 941 aaKnown RBP22.18■■□□□ 1.14
SS18-224ENST00000584083 ADRB2P07550 413 aa22.18■■□□□ 1.14
SS18-224ENST00000584083 LRPAP1P30533 357 aa22.18■■□□□ 1.14
SS18-224ENST00000584083 GUCY2FP51841 1108 aa22.18■■□□□ 1.14
SS18-224ENST00000584083 KRT85P78386 507 aa22.18■■□□□ 1.14
SS18-224ENST00000584083 TMEM132DQ14C87 1099 aa22.18■■□□□ 1.14
SS18-224ENST00000584083 RSPO2Q6UXX9 243 aaPredicted RBP22.18■■□□□ 1.14
SS18-224ENST00000584083 BEST2Q8NFU1 509 aa22.18■■□□□ 1.14
SS18-224ENST00000584083 EDAQ92838 391 aa22.18■■□□□ 1.14
SS18-224ENST00000584083 HPS3Q969F9 1004 aa22.18■■□□□ 1.14
SS18-224ENST00000584083 ACSF2Q96CM8 615 aaPredicted RBP22.18■■□□□ 1.14
SS18-224ENST00000584083 SPATA32Q96LK8 384 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms