RNA–Protein interactions for RNA: ENST00000583837.5

BRIP1-205, Transcript of BRCA1 interacting protein C-terminal helicase 1, human

TSL 5

Gene BRIP1, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRIP1-205	ENST00000583837	HACE1	Q8IYU2	909 aa		11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	RNF169	Q8NCN4	708 aa		11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	EHBP1	Q8NDI1	1231 aa		11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	CGRRF1	Q99675	332 aa		11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	CRACR2A	Q9BSW2	395 aa		11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	NXF3	Q9H4D5	531 aa	Known RBP	11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	FAM105A	Q9NUU6	356 aa		11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	KLK14	Q9P0G3	267 aa		11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	COG5	Q9UP83	839 aa		11.13	□□□□□ -0.63
BRIP1-205	ENST00000583837	TTC26	A0AVF1	554 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	ENPP3	O14638	875 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	N4BP1	O75113	896 aa	Known RBP	11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	ZNF623	O75123	536 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	PHACTR2	O75167	634 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	RECQL4	O94761	1208 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	GJB5	O95377	273 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	C4BPA	P04003	597 aa	Known RBP	11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	SKI	P12755	728 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	SLC9A1	P19634	815 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	GTF2H1	P32780	548 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	PBX1	P40424	430 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	KLK7	P49862	253 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	RAB27A	P51159	221 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	DEFB103A	P81534	67 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	TFAM	Q00059	246 aa	Known RBP	11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	MYL7	Q01449	175 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	CETN1	Q12798	172 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	BIRC3	Q13489	604 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	DUOXA2	Q1HG44	320 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	AAK1	Q2M2I8	961 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	CBWD6	Q4V339	395 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	CBWD3	Q5JTY5	395 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	CBWD5	Q5RIA9	395 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	JADE1	Q6IE81	842 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	CNKSR3	Q6P9H4	555 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	GBP6	Q6ZN66	633 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	SV2A	Q7L0J3	742 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	MRPL10	Q7Z7H8	261 aa	Known RBP	11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	ECHDC2	Q86YB7	292 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	CD302	Q8IX05	232 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	MICALL1	Q8N3F8	863 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	OR5B17	Q8NGF7	314 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	CACTIN	Q8WUQ7	758 aa	Known RBP	11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	ARNTL2	Q8WYA1	636 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	LPP	Q93052	612 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	PGBD4	Q96DM1	585 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	ANKRD36BP1	Q96IX9	119 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	FAM84A	Q96KN4	292 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	ERGIC2	Q96RQ1	377 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	LSM14B	Q9BX40	385 aa	Known RBP	11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	FTHL17	Q9BXU8	183 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	TMEM117	Q9H0C3	514 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	ASB7	Q9H672	318 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	PLEKHA5	Q9HAU0	1116 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	TMEM8A	Q9HCN3	771 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	RGS18	Q9NS28	235 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	LMCD1	Q9NZU5	365 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	ANK1	P16157	1881 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	TRIP11	Q15643	1979 aa		11.12	□□□□□ -0.63
BRIP1-205	ENST00000583837	CIT	O14578	2027 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837		A0A0U1RQF3	1178 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837		A0A1W2PQC6	194 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	P4HA2	O15460	535 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	MEFV	O15553	781 aa	Predicted RBP	11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	TNNC2	P02585	160 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	TMEM191B	P0C7N4	346 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	MXI1	P50539	228 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	AP3M2	P53677	418 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	ERVK-21	P61565	698 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	CLDN10	P78369	228 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	CCDC173	Q0VFZ6	552 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	EXOC3L4	Q17RC7	722 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	SPECC1L	Q69YQ0	1117 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	KRT39	Q6A163	491 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	SLC24A5	Q71RS6	500 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	PPFIBP1	Q86W92	1011 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	WDR49	Q8IV35	697 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	EFCAB13	Q8IY85	973 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	NEK11	Q8NG66	645 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	CPLX3	Q8WVH0	158 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	APBB2	Q92870	758 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	KIF12	Q96FN5	646 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	SNX27	Q96L92	541 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	CXCL16	Q9H2A7	254 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	RNF19A	Q9NV58	838 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	SIK3	Q9Y2K2	1263 aa		11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
BRIP1-205	ENST00000583837	PTPRJ	Q12913	1337 aa		11.1	□□□□□ -0.63
BRIP1-205	ENST00000583837	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.1	□□□□□ -0.63
BRIP1-205	ENST00000583837	GTPBP10	A4D1E9	387 aa	Known RBP	11.1	□□□□□ -0.63
BRIP1-205	ENST00000583837	MEIS3P2	A8K0S8	358 aa		11.1	□□□□□ -0.63
BRIP1-205	ENST00000583837		C9IYK1	514 aa		11.1	□□□□□ -0.63
BRIP1-205	ENST00000583837	HLA-DRA	P01903	254 aa		11.1	□□□□□ -0.63
BRIP1-205	ENST00000583837	PTMA	P06454	111 aa	Known RBP	11.1	□□□□□ -0.63
BRIP1-205	ENST00000583837	NFIC	P08651	508 aa		11.1	□□□□□ -0.63
BRIP1-205	ENST00000583837	PON1	P27169	355 aa		11.1	□□□□□ -0.63
BRIP1-205	ENST00000583837	DEK	P35659	375 aa	Known RBP	11.1	□□□□□ -0.63
BRIP1-205	ENST00000583837	KCNJ6	P48051	423 aa		11.1	□□□□□ -0.63
BRIP1-205	ENST00000583837	FAM189B	P81408	668 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms