RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 MIOSQ9NXC5 875 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 DPP3Q9NY33 737 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 KLK14Q9P0G3 267 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 NFE2L3Q9Y4A8 694 aa10.07□□□□□ -0.8
UBBP4-201ENST00000583708 FSD2A1L4K1 749 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 GTPBP10A4D1E9 387 aaKnown RBP10.06□□□□□ -0.8
UBBP4-201ENST00000583708 TRIM49BA6NDI0 452 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 MEIS3P2A8K0S8 358 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 PIRO00625 290 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 NRP1O14786 923 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 DDHD2O94830 711 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 P4HA1P13674 534 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 DNAJB2P25686 324 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 CASP4P49662 377 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 BCAR1P56945 870 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 STX17P56962 302 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 TFAMQ00059 246 aaKnown RBP10.06□□□□□ -0.8
UBBP4-201ENST00000583708 TAP1Q03518 808 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 UPP1Q16831 310 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 SGSM1Q2NKQ1 1148 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 ZACNQ401N2 412 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 SEZ6Q53EL9 994 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 ZBTB41Q5SVQ8 909 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 KRT39Q6A163 491 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 FAM117BQ6P1L5 589 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 TRAPPC11Q7Z392 1133 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 SLC39A11Q8N1S5 342 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 COLGALT1Q8NBJ5 622 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 FAM200AQ8TCP9 573 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 CCDC127Q96BQ5 260 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 TMEM169Q96HH4 297 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 DNAI2Q9GZS0 605 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 DNAJC25Q9H1X3 360 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 DSEQ9UL01 958 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 COQ4Q9Y3A0 265 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 DAAM1Q9Y4D1 1078 aa10.06□□□□□ -0.8
UBBP4-201ENST00000583708 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.06□□□□□ -0.8
UBBP4-201ENST00000583708 MRPL42Q9Y6G3 142 aaKnown RBP10.06□□□□□ -0.8
UBBP4-201ENST00000583708 SF3B1O75533 1304 aaKnown RBP eCLIP10.06□□□□□ -0.8
UBBP4-201ENST00000583708 LRRIQ3A6PVS8 624 aaPredicted RBP10.05□□□□□ -0.8
UBBP4-201ENST00000583708 GOLGA6L19H0YKK7 550 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 H3BNC9 293 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 PODXLO00592 558 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 SYN3O14994 580 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 MEFVO15553 781 aaPredicted RBP10.05□□□□□ -0.8
UBBP4-201ENST00000583708 ZC3H11AO75152 810 aaKnown RBP eCLIP10.05□□□□□ -0.8
UBBP4-201ENST00000583708 PHACTR2O75167 634 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 TADA2AO75478 443 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 AFPP02771 609 aaKnown RBP10.05□□□□□ -0.8
UBBP4-201ENST00000583708 C4BPAP04003 597 aaKnown RBP10.05□□□□□ -0.8
UBBP4-201ENST00000583708 CA3P07451 260 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 DLATP10515 647 aaKnown RBP10.05□□□□□ -0.8
UBBP4-201ENST00000583708 POU3F3P20264 500 aaPredicted RBP10.05□□□□□ -0.8
UBBP4-201ENST00000583708 CDK11BP21127 795 aaKnown RBP10.05□□□□□ -0.8
UBBP4-201ENST00000583708 OR1G1P47890 313 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 AARSP49588 968 aaKnown RBP eCLIP10.05□□□□□ -0.8
UBBP4-201ENST00000583708 RABGGTBP53611 331 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 CREMQ03060 361 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 TRPC3Q13507 836 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 MAN2A1Q16706 1144 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 PTPROQ16827 1216 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 SV2CQ496J9 727 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 PAN2Q504Q3 1202 aaKnown RBP10.05□□□□□ -0.8
UBBP4-201ENST00000583708 EPC2Q52LR7 807 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 TCP11X2Q5H9J9 407 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 CDKAL1Q5VV42 579 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 C9orf57Q5W0N0 161 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 PPP2R2DQ66LE6 453 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 C15orf39Q6ZRI6 1047 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 SV2AQ7L0J3 742 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 DDX53Q86TM3 631 aaKnown RBP10.05□□□□□ -0.8
UBBP4-201ENST00000583708 ZNF280BQ86YH2 543 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 IRF2BP1Q8IU81 584 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 APPL2Q8NEU8 664 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 SLC35C1Q96A29 364 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 IGSF21Q96ID5 467 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 MED15Q96RN5 788 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 IMPG2Q9BZV3 1241 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 NGRNQ9NPE2 291 aaKnown RBP10.05□□□□□ -0.8
UBBP4-201ENST00000583708 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.05□□□□□ -0.8
UBBP4-201ENST00000583708 GDAP2Q9NXN4 497 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 ADAM28Q9UKQ2 775 aa10.05□□□□□ -0.8
UBBP4-201ENST00000583708 RANBP2P49792 3224 aaKnown RBP10.05□□□□□ -0.8
UBBP4-201ENST00000583708 GRXCR1A8MXD5 290 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 FGF18O76093 207 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 B3GAT3O94766 335 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 EFEMP2O95967 443 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 NFICP08651 508 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 LINC00271P0C7V0 271 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 ZNF18P17022 549 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 TYMPP19971 482 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 IBSPP21815 317 aaPredicted RBP10.04□□□□□ -0.8
UBBP4-201ENST00000583708 CTNNB1P35222 781 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 MTIF2P46199 727 aaKnown RBP10.04□□□□□ -0.8
UBBP4-201ENST00000583708 SLC11A1P49279 550 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 TAF6P49848 677 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 GATMP50440 423 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 MXI1P50539 228 aa10.04□□□□□ -0.8
UBBP4-201ENST00000583708 AFF1P51825 1210 aaKnown RBP10.04□□□□□ -0.8
UBBP4-201ENST00000583708 LILRA4P59901 499 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms