RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 INPPL1O15357 1258 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 EFCAB14O75071 495 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 FGBP02675 491 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 IBSPP21815 317 aaPredicted RBP17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 PBX1P40424 430 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 PBX2P40425 430 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TFAMQ00059 246 aaKnown RBP17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TMEM132DQ14C87 1099 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 ZACNQ401N2 412 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 RASIP1Q5U651 963 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TRAPPC11Q7Z392 1133 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 KIF12Q96FN5 646 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 ANKRD36BP1Q96IX9 119 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 FAM84AQ96KN4 292 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 ZFP42Q96MM3 310 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 ERGIC2Q96RQ1 377 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 COQ4Q9Y3A0 265 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TTC3P53804 2025 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 ANK1P16157 1881 aa17.67■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TRIP11Q15643 1979 aa17.66■□□□□ 0.42
CDK5RAP3-228ENST00000583363 A0A1W2PQC6 194 aa17.66■□□□□ 0.42
CDK5RAP3-228ENST00000583363 PTGESO14684 152 aa17.66■□□□□ 0.42
CDK5RAP3-228ENST00000583363 BAIAP3O94812 1187 aa17.66■□□□□ 0.42
CDK5RAP3-228ENST00000583363 ACTN1P12814 892 aa17.66■□□□□ 0.42
CDK5RAP3-228ENST00000583363 MLH1P40692 756 aa17.66■□□□□ 0.42
CDK5RAP3-228ENST00000583363 MXI1P50539 228 aa17.66■□□□□ 0.42
CDK5RAP3-228ENST00000583363 AFF1P51825 1210 aaKnown RBP17.66■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TDRD10Q5VZ19 366 aaKnown RBP17.66■□□□□ 0.42
CDK5RAP3-228ENST00000583363 GBP6Q6ZN66 633 aa17.66■□□□□ 0.42
CDK5RAP3-228ENST00000583363 ZNF365Q70YC5 407 aa17.66■□□□□ 0.42
CDK5RAP3-228ENST00000583363 EHBP1Q8NDI1 1231 aa17.66■□□□□ 0.42
CDK5RAP3-228ENST00000583363 PBX4Q9BYU1 374 aa17.66■□□□□ 0.42
CDK5RAP3-228ENST00000583363 LRFN2Q9ULH4 789 aa17.66■□□□□ 0.42
CDK5RAP3-228ENST00000583363 CHD9Q3L8U1 2897 aa17.66■□□□□ 0.42
CDK5RAP3-228ENST00000583363 VNN1O95497 513 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TNNC2P02585 160 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TMEM191BP0C7N4 346 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 CYP3A5P20815 502 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 MYL7Q01449 175 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 CETN1Q12798 172 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 PTPN21Q16825 1174 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 EXOC3L4Q17RC7 722 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 EPC2Q52LR7 807 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TJAP1Q5JTD0 557 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 GLRA4Q5JXX5 417 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 CLLU1OSQ5K130 101 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 SCARA3Q6AZY7 606 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 NPAS4Q8IUM7 802 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 LMO3Q8TAP4 145 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 TOP1MTQ969P6 601 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 PPP1R10Q96QC0 940 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 CRACR2AQ9BSW2 395 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 MTMR12Q9C0I1 747 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 DPP3Q9NY33 737 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 UBQLN1Q9UMX0 589 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 SIK3Q9Y2K2 1263 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 GBF1Q92538 1859 aa17.65■□□□□ 0.42
CDK5RAP3-228ENST00000583363 CST3P01034 146 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 THP07101 528 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 FGFR1P11362 822 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 SLC9A1P19634 815 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 PON1P27169 355 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 CDC25BP30305 580 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 BIRC3Q13489 604 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 SYCP1Q15431 976 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 DPY19L2P1Q6NXN4 242 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 GLB1LQ6UWU2 654 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 OTOP2Q7RTS6 562 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 VSTM4Q8IW00 320 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 C1orf127Q8N9H9 656 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 FBXL13Q8NEE6 735 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 BEST2Q8NFU1 509 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 CXorf38Q8TB03 319 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 HELQQ8TDG4 1101 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 TAS1R2Q8TE23 839 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 SEMA4DQ92854 862 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 C18orf25Q96B23 403 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 RPS6KC1Q96S38 1066 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 RAB20Q9NX57 234 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 PLAGL2Q9UPG8 496 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 MICAL3Q7RTP6 2002 aa17.64■□□□□ 0.41
CDK5RAP3-228ENST00000583363 HOXA2O43364 376 aa17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 XPOTO43592 962 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 PHACTR2O75167 634 aa17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 LRRN2O75325 713 aa17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 HLA-DRAP01903 254 aa17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 AMHP03971 560 aa17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 KLK7P49862 253 aa17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 SCNN1GP51170 649 aa17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 GUCY2FP51841 1108 aa17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 WDR5P61964 334 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 NAB2Q15742 525 aa17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 NOMO2Q5JPE7 1267 aa17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 PSRC1Q6PGN9 363 aaPredicted RBP17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 TMEM130Q8N3G9 435 aa17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 CASD1Q96PB1 797 aa17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 PRDM12Q9H4Q4 367 aa17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 SLC38A7Q9NVC3 462 aa17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 KANSL3Q9P2N6 904 aa17.63■□□□□ 0.41
CDK5RAP3-228ENST00000583363 SIX4Q9UIU6 781 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms