RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 MAP4K3Q8IVH8 894 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 MCPH1Q8NEM0 835 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 DDX1Q92499 740 aaKnown RBP13.55□□□□□ -0.24
TOP3A-215ENST00000583328 ASB16Q96NS5 453 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 TTC12Q9H892 705 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-215ENST00000583328 CYP4F11Q9HBI6 524 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 ZSWIM6Q9HCJ5 1215 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 GJB4Q9NTQ9 266 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 USP20Q9Y2K6 914 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 CYP46A1Q9Y6A2 500 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 MAP1BP46821 2468 aaKnown RBP13.54□□□□□ -0.24
TOP3A-215ENST00000583328 WDR27A2RRH5 827 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 I3L4J1 428 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 ACKR2O00590 384 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 ZNF263O14978 683 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 GDF9O60383 454 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 CDKL5O76039 1030 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 MICAL2O94851 1124 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 CHRNB1P11230 501 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 PSMC3P17980 439 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 CCNE1P24864 410 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 CNR2P34972 360 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 ROR1Q01973 937 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 EEF1DP3Q658K8 133 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 IL31Q6EBC2 164 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 IQCEQ6IPM2 695 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 CD300LGQ6UXG3 332 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 VITQ6UXI7 678 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 ELMOD1Q8N336 334 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 DEPTORQ8TB45 409 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 DEPDC1BQ8WUY9 529 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 SMARCD2Q92925 531 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 UROC1Q96N76 676 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 PPP1R10Q96QC0 940 aaKnown RBP13.54□□□□□ -0.24
TOP3A-215ENST00000583328 TRPV5Q9NQA5 729 aa13.54□□□□□ -0.24
TOP3A-215ENST00000583328 PATJQ8NI35 1801 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 FAM205CA6NFA0 338 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 NRG2O14511 850 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-215ENST00000583328 FOXD2O60548 495 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-215ENST00000583328 ABLIM3O94929 683 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 ATF2P15336 505 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 VIPR2P41587 438 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 CCR2P41597 374 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 TXKP42681 527 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 DMWDQ09019 674 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 SRSF5Q13243 272 aaKnown RBP13.53□□□□□ -0.24
TOP3A-215ENST00000583328 UPP1Q16831 310 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 DCAF4L1Q3SXM0 396 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 HEATR6Q6AI08 1181 aaKnown RBP13.53□□□□□ -0.24
TOP3A-215ENST00000583328 SLC8B1Q6J4K2 584 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 CEP68Q76N32 757 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 LONP2Q86WA8 852 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 SPEM1Q8N4L4 309 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 ZNF512Q96ME7 567 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-215ENST00000583328 ZSWIM3Q96MP5 696 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 GOLGA2P5Q9HBQ8 144 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 ANGPTL2Q9UKU9 493 aa13.53□□□□□ -0.24
TOP3A-215ENST00000583328 H7C4K7 107 aa13.52□□□□□ -0.25
TOP3A-215ENST00000583328 SEC24AO95486 1093 aa13.52□□□□□ -0.25
TOP3A-215ENST00000583328 KRT2P35908 639 aa13.52□□□□□ -0.25
TOP3A-215ENST00000583328 NR5A1Q13285 461 aa13.52□□□□□ -0.25
TOP3A-215ENST00000583328 LRRC32Q14392 662 aa13.52□□□□□ -0.25
TOP3A-215ENST00000583328 GAS6Q14393 721 aa13.52□□□□□ -0.25
TOP3A-215ENST00000583328 AASDHQ4L235 1098 aaPredicted RBP13.52□□□□□ -0.25
TOP3A-215ENST00000583328 APBB1IPQ7Z5R6 666 aaPredicted RBP13.52□□□□□ -0.25
TOP3A-215ENST00000583328 MFSD6LQ8IWD5 586 aa13.52□□□□□ -0.25
TOP3A-215ENST00000583328 YAF2Q8IY57 180 aa13.52□□□□□ -0.25
TOP3A-215ENST00000583328 TCEAL8Q8IYN2 117 aa13.52□□□□□ -0.25
TOP3A-215ENST00000583328 CSGALNACT1Q8TDX6 532 aa13.52□□□□□ -0.25
TOP3A-215ENST00000583328 BSNDQ8WZ55 320 aa13.52□□□□□ -0.25
TOP3A-215ENST00000583328 BRMS1Q9HCU9 246 aa13.52□□□□□ -0.25
TOP3A-215ENST00000583328 INSL5Q9Y5Q6 135 aa13.52□□□□□ -0.25
TOP3A-215ENST00000583328 NOTCH4Q99466 2003 aa13.52□□□□□ -0.25
TOP3A-215ENST00000583328 SMIM28A0A1B0GU29 152 aa13.51□□□□□ -0.25
TOP3A-215ENST00000583328 HEPACAM2A8MVW5 462 aa13.51□□□□□ -0.25
TOP3A-215ENST00000583328 DTNBO60941 627 aa13.51□□□□□ -0.25
TOP3A-215ENST00000583328 MYL4P12829 197 aa13.51□□□□□ -0.25
TOP3A-215ENST00000583328 GJA1P17302 382 aa13.51□□□□□ -0.25
TOP3A-215ENST00000583328 NAMPTP43490 491 aa13.51□□□□□ -0.25
TOP3A-215ENST00000583328 KPNA1P52294 538 aaPredicted RBP13.51□□□□□ -0.25
TOP3A-215ENST00000583328 YARSP54577 528 aaKnown RBP13.51□□□□□ -0.25
TOP3A-215ENST00000583328 SCRN1Q12765 414 aa13.51□□□□□ -0.25
TOP3A-215ENST00000583328 PTGDRQ13258 359 aa13.51□□□□□ -0.25
TOP3A-215ENST00000583328 N4BP2L1Q5TBK1 243 aaPredicted RBP13.51□□□□□ -0.25
TOP3A-215ENST00000583328 ATF7IP2Q5U623 682 aa13.51□□□□□ -0.25
TOP3A-215ENST00000583328 C3orf58Q8NDZ4 430 aa13.51□□□□□ -0.25
TOP3A-215ENST00000583328 ZSCAN18Q8TBC5 510 aaPredicted RBP13.51□□□□□ -0.25
TOP3A-215ENST00000583328 NACC1Q96RE7 527 aa13.51□□□□□ -0.25
TOP3A-215ENST00000583328 CCDC113Q9H0I3 377 aa13.51□□□□□ -0.25
TOP3A-215ENST00000583328 SLITRK6Q9H5Y7 841 aa13.51□□□□□ -0.25
TOP3A-215ENST00000583328 C8orf33Q9H7E9 229 aaPredicted RBP13.51□□□□□ -0.25
TOP3A-215ENST00000583328 RBM12Q9NTZ6 932 aaKnown RBP13.51□□□□□ -0.25
TOP3A-215ENST00000583328 PDRG1Q9NUG6 133 aa13.51□□□□□ -0.25
TOP3A-215ENST00000583328 DAXXQ9UER7 740 aaPredicted RBP13.51□□□□□ -0.25
TOP3A-215ENST00000583328 CHD8Q9HCK8 2581 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 STK36Q9NRP7 1315 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 PODXLO00592 558 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 SYN3O14994 580 aa13.5□□□□□ -0.25
TOP3A-215ENST00000583328 AXIN1O15169 862 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms