RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 GUCY1B3Q02153 619 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 TRIM29Q14134 588 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 FAM78AQ5JUQ0 283 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 ZNF461Q8TAF7 563 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 ERMNQ8TAM6 284 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 ELSPBP1Q96BH3 223 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 ZMAT2Q96NC0 199 aaKnown RBP17.75■□□□□ 0.43
SREBF1-221ENST00000583080 CNTNAP3BQ96NU0 1288 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 CNTNAP3Q9BZ76 1288 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 CDT1Q9H211 546 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 NDRG2Q9UN36 371 aaKnown RBP17.75■□□□□ 0.43
SREBF1-221ENST00000583080 TICRRQ7Z2Z1 1910 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 PODXLO00592 558 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 TRAPPC3O43617 180 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 TDGF1P13385 188 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 PTPN2P17706 415 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 TGM1P22735 817 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 EFNA5P52803 228 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 ATXN1P54253 815 aaKnown RBP17.74■□□□□ 0.43
SREBF1-221ENST00000583080 ADCY1Q08828 1119 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 ZNF174Q15697 407 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 DNASE1L2Q92874 299 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 IFT74Q96LB3 600 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 NELL2Q99435 816 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 BHMT2Q9H2M3 363 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 CYP4F11Q9HBI6 524 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 PARD6AQ9NPB6 346 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 TNFSF13BQ9Y275 285 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 INSL5Q9Y5Q6 135 aa17.74■□□□□ 0.43
SREBF1-221ENST00000583080 NCANO14594 1321 aa17.73■□□□□ 0.43
SREBF1-221ENST00000583080 NCAM2O15394 837 aa17.73■□□□□ 0.43
SREBF1-221ENST00000583080 MEFVO15553 781 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-221ENST00000583080 TBC1D4O60343 1298 aa17.73■□□□□ 0.43
SREBF1-221ENST00000583080 GRM5P41594 1212 aa17.73■□□□□ 0.43
SREBF1-221ENST00000583080 ANAPC15P60006 121 aa17.73■□□□□ 0.43
SREBF1-221ENST00000583080 ZNF568Q3ZCX4 644 aa17.73■□□□□ 0.43
SREBF1-221ENST00000583080 XKR4Q5GH76 650 aa17.73■□□□□ 0.43
SREBF1-221ENST00000583080 ALKAL1Q6UXT8 129 aa17.73■□□□□ 0.43
SREBF1-221ENST00000583080 TCEAL8Q8IYN2 117 aa17.73■□□□□ 0.43
SREBF1-221ENST00000583080 BORCS6Q96GS4 357 aa17.73■□□□□ 0.43
SREBF1-221ENST00000583080 ZSWIM3Q96MP5 696 aa17.73■□□□□ 0.43
SREBF1-221ENST00000583080 ASB16Q96NS5 453 aa17.73■□□□□ 0.43
SREBF1-221ENST00000583080 CHRDQ9H2X0 955 aa17.73■□□□□ 0.43
SREBF1-221ENST00000583080 BRD9Q9H8M2 597 aa17.73■□□□□ 0.43
SREBF1-221ENST00000583080 USP18Q9UMW8 372 aa17.73■□□□□ 0.43
SREBF1-221ENST00000583080 MRPS17Q9Y2R5 130 aaKnown RBP17.73■□□□□ 0.43
SREBF1-221ENST00000583080 PHLPP2Q6ZVD8 1323 aa17.72■□□□□ 0.43
SREBF1-221ENST00000583080 MOSPD3O75425 235 aa17.72■□□□□ 0.43
SREBF1-221ENST00000583080 ATF2P15336 505 aa17.72■□□□□ 0.43
SREBF1-221ENST00000583080 ELF1P32519 619 aa17.72■□□□□ 0.43
SREBF1-221ENST00000583080 CCT6AP40227 531 aaKnown RBP17.72■□□□□ 0.43
SREBF1-221ENST00000583080 YARSP54577 528 aaKnown RBP17.72■□□□□ 0.43
SREBF1-221ENST00000583080 LPAL2Q16609 132 aa17.72■□□□□ 0.43
SREBF1-221ENST00000583080 VITQ6UXI7 678 aa17.72■□□□□ 0.43
SREBF1-221ENST00000583080 TAS1R3Q7RTX0 852 aa17.72■□□□□ 0.43
SREBF1-221ENST00000583080 HS6ST3Q8IZP7 471 aa17.72■□□□□ 0.43
SREBF1-221ENST00000583080 TMEM130Q8N3G9 435 aa17.72■□□□□ 0.43
SREBF1-221ENST00000583080 KIFAP3Q92845 792 aa17.72■□□□□ 0.43
SREBF1-221ENST00000583080 C18orf25Q96B23 403 aaPredicted RBP17.72■□□□□ 0.43
SREBF1-221ENST00000583080 ACO2Q99798 780 aaKnown RBP17.72■□□□□ 0.43
SREBF1-221ENST00000583080 CCDC94Q9BW85 323 aaPredicted RBP17.72■□□□□ 0.43
SREBF1-221ENST00000583080 ZFP14Q9HCL3 533 aa17.72■□□□□ 0.43
SREBF1-221ENST00000583080 PTPRHQ9HD43 1115 aa17.72■□□□□ 0.43
SREBF1-221ENST00000583080 TOPORSQ9NS56 1045 aaPredicted RBP17.72■□□□□ 0.43
SREBF1-221ENST00000583080 FBXL5Q9UKA1 691 aa17.72■□□□□ 0.43
SREBF1-221ENST00000583080 ACACBO00763 2458 aa17.71■□□□□ 0.43
SREBF1-221ENST00000583080 K7ERI5 159 aa17.71■□□□□ 0.43
SREBF1-221ENST00000583080 ABLIM1O14639 778 aa17.71■□□□□ 0.43
SREBF1-221ENST00000583080 SYN3O14994 580 aa17.71■□□□□ 0.43
SREBF1-221ENST00000583080 GJA1P17302 382 aa17.71■□□□□ 0.43
SREBF1-221ENST00000583080 LMNB2Q03252 620 aa17.71■□□□□ 0.43
SREBF1-221ENST00000583080 HAUS3Q68CZ6 603 aa17.71■□□□□ 0.43
SREBF1-221ENST00000583080 PDZD4Q76G19 769 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-221ENST00000583080 APBB1IPQ7Z5R6 666 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-221ENST00000583080 DAW1Q8N136 415 aa17.71■□□□□ 0.43
SREBF1-221ENST00000583080 GPR161Q8N6U8 529 aaKnown RBP17.71■□□□□ 0.43
SREBF1-221ENST00000583080 SECISBP2LQ93073 1101 aaKnown RBP17.71■□□□□ 0.43
SREBF1-221ENST00000583080 TRMT61BQ9BVS5 477 aaKnown RBP17.71■□□□□ 0.43
SREBF1-221ENST00000583080 TARS2Q9BW92 718 aaKnown RBP17.71■□□□□ 0.43
SREBF1-221ENST00000583080 SLC38A7Q9NVC3 462 aa17.71■□□□□ 0.43
SREBF1-221ENST00000583080 CEP72Q9P209 647 aa17.71■□□□□ 0.43
SREBF1-221ENST00000583080 CDV3Q9UKY7 258 aaKnown RBP17.71■□□□□ 0.43
SREBF1-221ENST00000583080 DCDC2BA2VCK2 349 aa17.7■□□□□ 0.42
SREBF1-221ENST00000583080 CCDC169A6NNP5 214 aa17.7■□□□□ 0.42
SREBF1-221ENST00000583080 GDI1P31150 447 aa17.7■□□□□ 0.42
SREBF1-221ENST00000583080 VIPR2P41587 438 aa17.7■□□□□ 0.42
SREBF1-221ENST00000583080 NPTX2P47972 431 aa17.7■□□□□ 0.42
SREBF1-221ENST00000583080 PEX3P56589 373 aa17.7■□□□□ 0.42
SREBF1-221ENST00000583080 MRPL58Q14197 206 aaKnown RBP17.7■□□□□ 0.42
SREBF1-221ENST00000583080 NBR1Q14596 966 aa17.7■□□□□ 0.42
SREBF1-221ENST00000583080 CTXN3Q4LDR2 81 aa17.7■□□□□ 0.42
SREBF1-221ENST00000583080 TTC38Q5R3I4 469 aa17.7■□□□□ 0.42
SREBF1-221ENST00000583080 MAP4K3Q8IVH8 894 aa17.7■□□□□ 0.42
SREBF1-221ENST00000583080 SMARCD2Q92925 531 aa17.7■□□□□ 0.42
SREBF1-221ENST00000583080 ZNF334Q9HCZ1 680 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-221ENST00000583080 DDX19AQ9NUU7 478 aaKnown RBP17.7■□□□□ 0.42
SREBF1-221ENST00000583080 GMEB2Q9UKD1 530 aa17.7■□□□□ 0.42
SREBF1-221ENST00000583080 KIAA1024Q9UPX6 916 aa17.7■□□□□ 0.42
SREBF1-221ENST00000583080 NUB1Q9Y5A7 615 aa17.7■□□□□ 0.42
SREBF1-221ENST00000583080 PIAS3Q9Y6X2 628 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms