RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 CYP24A1Q07973 514 aa17.8■□□□□ 0.44
RNF43-206ENST00000582293 TMEM132DQ14C87 1099 aa17.8■□□□□ 0.44
RNF43-206ENST00000582293 CCDC85BQ15834 202 aaPredicted RBP17.8■□□□□ 0.44
RNF43-206ENST00000582293 PLPP4Q5VZY2 271 aa17.8■□□□□ 0.44
RNF43-206ENST00000582293 FUT10Q6P4F1 479 aa17.8■□□□□ 0.44
RNF43-206ENST00000582293 DCLRE1AQ6PJP8 1040 aa17.8■□□□□ 0.44
RNF43-206ENST00000582293 MICALL1Q8N3F8 863 aa17.8■□□□□ 0.44
RNF43-206ENST00000582293 MAFAQ8NHW3 353 aaPredicted RBP17.8■□□□□ 0.44
RNF43-206ENST00000582293 NOC3LQ8WTT2 800 aaKnown RBP17.8■□□□□ 0.44
RNF43-206ENST00000582293 AUTS2Q8WXX7 1259 aa17.8■□□□□ 0.44
RNF43-206ENST00000582293 B3GALT6Q96L58 329 aa17.8■□□□□ 0.44
RNF43-206ENST00000582293 MFSD14AQ96MC6 490 aa17.8■□□□□ 0.44
RNF43-206ENST00000582293 TSPAN18Q96SJ8 248 aa17.8■□□□□ 0.44
RNF43-206ENST00000582293 TCF25Q9BQ70 676 aa17.8■□□□□ 0.44
RNF43-206ENST00000582293 HERC2P3Q9BVR0 1158 aa17.8■□□□□ 0.44
RNF43-206ENST00000582293 NSUN3Q9H649 340 aaKnown RBP17.8■□□□□ 0.44
RNF43-206ENST00000582293 CHST7Q9NS84 486 aa17.8■□□□□ 0.44
RNF43-206ENST00000582293 PUF60Q9UHX1 559 aaKnown RBP17.8■□□□□ 0.44
RNF43-206ENST00000582293 VWA8A3KMH1 1905 aa17.8■□□□□ 0.44
RNF43-206ENST00000582293 MYO7AQ13402 2215 aa17.79■□□□□ 0.44
RNF43-206ENST00000582293 TRIM49BA6NDI0 452 aa17.79■□□□□ 0.44
RNF43-206ENST00000582293 GOLGA6L22H0YM25 854 aa17.79■□□□□ 0.44
RNF43-206ENST00000582293 CALUO43852 315 aaPredicted RBP17.79■□□□□ 0.44
RNF43-206ENST00000582293 TADA2AO75478 443 aa17.79■□□□□ 0.44
RNF43-206ENST00000582293 B3GAT3O94766 335 aa17.79■□□□□ 0.44
RNF43-206ENST00000582293 KIF20AO95235 890 aa17.79■□□□□ 0.44
RNF43-206ENST00000582293 RPL9P32969 192 aaKnown RBP17.79■□□□□ 0.44
RNF43-206ENST00000582293 BRCC3P46736 316 aa17.79■□□□□ 0.44
RNF43-206ENST00000582293 HYAL1Q12794 435 aa17.79■□□□□ 0.44
RNF43-206ENST00000582293 MYBPC2Q14324 1141 aa17.79■□□□□ 0.44
RNF43-206ENST00000582293 PSMD6Q15008 389 aa17.79■□□□□ 0.44
RNF43-206ENST00000582293 LMBRD2Q68DH5 695 aaPredicted RBP17.79■□□□□ 0.44
RNF43-206ENST00000582293 ANKRD40Q6AI12 368 aa17.79■□□□□ 0.44
RNF43-206ENST00000582293 ZC3H3Q8IXZ2 948 aaKnown RBP17.79■□□□□ 0.44
RNF43-206ENST00000582293 DDX27Q96GQ7 796 aaKnown RBP17.79■□□□□ 0.44
RNF43-206ENST00000582293 NUP62CLQ9H1M0 184 aa17.79■□□□□ 0.44
RNF43-206ENST00000582293 KIAA1586Q9HCI6 787 aa17.79■□□□□ 0.44
RNF43-206ENST00000582293 ANO9A1A5B4 782 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 C2orf71A6NGG8 1288 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 I3L4J1 428 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 PIRO00625 290 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 EXOC3O60645 756 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 COL19A1Q14993 1142 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 PTPN14Q15678 1187 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 TIGD5Q53EQ6 642 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 KIAA0319Q5VV43 1072 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 C9orf57Q5W0N0 161 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 TMC7Q7Z402 723 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 MRPL43Q8N983 215 aaKnown RBP17.78■□□□□ 0.44
RNF43-206ENST00000582293 C1orf127Q8N9H9 656 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 OR5B17Q8NGF7 314 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 PPM1EQ8WY54 764 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 POP1Q99575 1024 aaKnown RBP17.78■□□□□ 0.44
RNF43-206ENST00000582293 ENTPD7Q9NQZ7 604 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 IRAK3Q9Y616 596 aa17.78■□□□□ 0.44
RNF43-206ENST00000582293 SPTLC1O15269 473 aa17.77■□□□□ 0.44
RNF43-206ENST00000582293 AKAP3O75969 853 aa17.77■□□□□ 0.44
RNF43-206ENST00000582293 NR2F2P24468 414 aa17.77■□□□□ 0.44
RNF43-206ENST00000582293 EDRF1Q3B7T1 1238 aa17.77■□□□□ 0.44
RNF43-206ENST00000582293 RTP2Q5QGT7 225 aa17.77■□□□□ 0.44
RNF43-206ENST00000582293 C1orf220Q5T0J3 134 aa17.77■□□□□ 0.44
RNF43-206ENST00000582293 RBM43Q6ZSC3 357 aaKnown RBP17.77■□□□□ 0.44
RNF43-206ENST00000582293 NT5DC4Q86YG4 428 aa17.77■□□□□ 0.44
RNF43-206ENST00000582293 TRIML1Q8N9V2 468 aa17.77■□□□□ 0.44
RNF43-206ENST00000582293 BEST2Q8NFU1 509 aa17.77■□□□□ 0.44
RNF43-206ENST00000582293 ZNF516Q92618 1163 aa17.77■□□□□ 0.44
RNF43-206ENST00000582293 EEF2KMTQ96G04 330 aa17.77■□□□□ 0.44
RNF43-206ENST00000582293 MED15Q96RN5 788 aa17.77■□□□□ 0.44
RNF43-206ENST00000582293 GTPBP4Q9BZE4 634 aaKnown RBP17.77■□□□□ 0.44
RNF43-206ENST00000582293 NGRNQ9NPE2 291 aaKnown RBP17.77■□□□□ 0.44
RNF43-206ENST00000582293 PRDM6Q9NQX0 595 aa17.77■□□□□ 0.44
RNF43-206ENST00000582293 DPP3Q9NY33 737 aa17.77■□□□□ 0.44
RNF43-206ENST00000582293 SIX4Q9UIU6 781 aa17.77■□□□□ 0.44
RNF43-206ENST00000582293 SPTBN5Q9NRC6 3674 aaKnown RBP17.77■□□□□ 0.43
RNF43-206ENST00000582293 SF3B1O75533 1304 aaKnown RBP eCLIP17.76■□□□□ 0.43
RNF43-206ENST00000582293 PER2O15055 1255 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 SLC34A2O95436 690 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 CXCL14O95715 111 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 FGFR3P22607 806 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 CCNE1P24864 410 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 AARSP49588 968 aaKnown RBP eCLIP17.76■□□□□ 0.43
RNF43-206ENST00000582293 MCCD1P59942 119 aaPredicted RBP17.76■□□□□ 0.43
RNF43-206ENST00000582293 DLG4P78352 724 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 RBM10P98175 930 aaKnown RBP17.76■□□□□ 0.43
RNF43-206ENST00000582293 TFAMQ00059 246 aaKnown RBP17.76■□□□□ 0.43
RNF43-206ENST00000582293 DSG1Q02413 1049 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 KCNC3Q14003 757 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 SMC1AQ14683 1233 aaKnown RBP17.76■□□□□ 0.43
RNF43-206ENST00000582293 DUSP6Q16828 381 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 PDE12Q6L8Q7 609 aaKnown RBP17.76■□□□□ 0.43
RNF43-206ENST00000582293 TTI2Q6NXR4 508 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 VN1R2Q8NFZ6 395 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 MICAL1Q8TDZ2 1067 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 PARD3BQ8TEW8 1205 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 BORCS6Q96GS4 357 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 DHTKD1Q96HY7 919 aaPredicted RBP17.76■□□□□ 0.43
RNF43-206ENST00000582293 DUSP9Q99956 384 aaKnown RBP17.76■□□□□ 0.43
RNF43-206ENST00000582293 MTMR12Q9C0I1 747 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 INTS13Q9NVM9 706 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 PRUNE2Q8WUY3 3088 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms