RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 STX17P56962 302 aa21.7■■□□□ 1.06
TOP3A-213ENST00000582230 STX1AQ16623 288 aa21.7■■□□□ 1.06
TOP3A-213ENST00000582230 DUOXA2Q1HG44 320 aa21.7■■□□□ 1.06
TOP3A-213ENST00000582230 FILIP1Q7Z7B0 1213 aa21.7■■□□□ 1.06
TOP3A-213ENST00000582230 DEFB123Q8N688 67 aa21.7■■□□□ 1.06
TOP3A-213ENST00000582230 SPPL3Q8TCT6 385 aa21.7■■□□□ 1.06
TOP3A-213ENST00000582230 PARD3BQ8TEW8 1205 aa21.7■■□□□ 1.06
TOP3A-213ENST00000582230 ANKRD36BP1Q96IX9 119 aa21.7■■□□□ 1.06
TOP3A-213ENST00000582230 CGRRF1Q99675 332 aa21.7■■□□□ 1.06
TOP3A-213ENST00000582230 PAAF1Q9BRP4 392 aa21.7■■□□□ 1.06
TOP3A-213ENST00000582230 LMAN2LQ9H0V9 348 aa21.7■■□□□ 1.06
TOP3A-213ENST00000582230 PRDM12Q9H4Q4 367 aa21.7■■□□□ 1.06
TOP3A-213ENST00000582230 INTS13Q9NVM9 706 aa21.7■■□□□ 1.06
TOP3A-213ENST00000582230 DPP3Q9NY33 737 aa21.7■■□□□ 1.06
TOP3A-213ENST00000582230 PODXLO00592 558 aa21.69■■□□□ 1.06
TOP3A-213ENST00000582230 TADA2AO75478 443 aa21.69■■□□□ 1.06
TOP3A-213ENST00000582230 B3GAT3O94766 335 aa21.69■■□□□ 1.06
TOP3A-213ENST00000582230 TMEM191BP0C7N4 346 aa21.69■■□□□ 1.06
TOP3A-213ENST00000582230 TNNI1P19237 187 aa21.69■■□□□ 1.06
TOP3A-213ENST00000582230 AP3M2P53677 418 aa21.69■■□□□ 1.06
TOP3A-213ENST00000582230 CLDN10P78369 228 aa21.69■■□□□ 1.06
TOP3A-213ENST00000582230 DDX53Q86TM3 631 aaKnown RBP21.69■■□□□ 1.06
TOP3A-213ENST00000582230 TMEM173Q86WV6 379 aaPredicted RBP21.69■■□□□ 1.06
TOP3A-213ENST00000582230 EEF2KMTQ96G04 330 aa21.69■■□□□ 1.06
TOP3A-213ENST00000582230 FAM161BQ96MY7 647 aa21.69■■□□□ 1.06
TOP3A-213ENST00000582230 ALG13Q9NP73 1137 aaKnown RBP21.69■■□□□ 1.06
TOP3A-213ENST00000582230 MARCH5Q9NX47 278 aa21.69■■□□□ 1.06
TOP3A-213ENST00000582230 CACNG4Q9UBN1 327 aa21.69■■□□□ 1.06
TOP3A-213ENST00000582230 ADAM28Q9UKQ2 775 aa21.69■■□□□ 1.06
TOP3A-213ENST00000582230 IKBKBO14920 756 aa21.68■■□□□ 1.06
TOP3A-213ENST00000582230 TNNC2P02585 160 aa21.68■■□□□ 1.06
TOP3A-213ENST00000582230 PAX3P23760 479 aa21.68■■□□□ 1.06
TOP3A-213ENST00000582230 VAMP7P51809 220 aa21.68■■□□□ 1.06
TOP3A-213ENST00000582230 MCCD1P59942 119 aaPredicted RBP21.68■■□□□ 1.06
TOP3A-213ENST00000582230 PTPROQ16827 1216 aa21.68■■□□□ 1.06
TOP3A-213ENST00000582230 Q7L0L9 218 aa21.68■■□□□ 1.06
TOP3A-213ENST00000582230 GDPD5Q8WTR4 605 aa21.68■■□□□ 1.06
TOP3A-213ENST00000582230 BCL7CQ8WUZ0 217 aaPredicted RBP21.68■■□□□ 1.06
TOP3A-213ENST00000582230 RABGGTAQ92696 567 aa21.68■■□□□ 1.06
TOP3A-213ENST00000582230 METTL14Q9HCE5 456 aaKnown RBP21.68■■□□□ 1.06
TOP3A-213ENST00000582230 LMCD1Q9NZU5 365 aa21.68■■□□□ 1.06
TOP3A-213ENST00000582230 ITGA11Q9UKX5 1188 aa21.68■■□□□ 1.06
TOP3A-213ENST00000582230 RALGAPA2Q2PPJ7 1873 aa21.68■■□□□ 1.06
TOP3A-213ENST00000582230 ANO9A1A5B4 782 aa21.67■■□□□ 1.06
TOP3A-213ENST00000582230 RFXAPO00287 272 aa21.67■■□□□ 1.06
TOP3A-213ENST00000582230 GRM6O15303 877 aa21.67■■□□□ 1.06
TOP3A-213ENST00000582230 TRAPPC3O43617 180 aa21.67■■□□□ 1.06
TOP3A-213ENST00000582230 LPXNO60711 386 aa21.67■■□□□ 1.06
TOP3A-213ENST00000582230 KIF4AO95239 1232 aa21.67■■□□□ 1.06
TOP3A-213ENST00000582230 GNA14O95837 355 aa21.67■■□□□ 1.06
TOP3A-213ENST00000582230 TYRO3Q06418 890 aa21.67■■□□□ 1.06
TOP3A-213ENST00000582230 ELAVL2Q12926 359 aaKnown RBP21.67■■□□□ 1.06
TOP3A-213ENST00000582230 BFSP1Q12934 665 aa21.67■■□□□ 1.06
TOP3A-213ENST00000582230 BMS1Q14692 1282 aaKnown RBP21.67■■□□□ 1.06
TOP3A-213ENST00000582230 C9orf57Q5W0N0 161 aa21.67■■□□□ 1.06
TOP3A-213ENST00000582230 PDE12Q6L8Q7 609 aaKnown RBP21.67■■□□□ 1.06
TOP3A-213ENST00000582230 PLEKHO2Q8TD55 490 aa21.67■■□□□ 1.06
TOP3A-213ENST00000582230 POF1BQ8WVV4 589 aa21.67■■□□□ 1.06
TOP3A-213ENST00000582230 BORCS6Q96GS4 357 aa21.67■■□□□ 1.06
TOP3A-213ENST00000582230 GAS2L1Q99501 681 aaPredicted RBP21.67■■□□□ 1.06
TOP3A-213ENST00000582230 POP1Q99575 1024 aaKnown RBP21.67■■□□□ 1.06
TOP3A-213ENST00000582230 SRRTQ9BXP5 876 aaKnown RBP21.67■■□□□ 1.06
TOP3A-213ENST00000582230 MTMR12Q9C0I1 747 aa21.67■■□□□ 1.06
TOP3A-213ENST00000582230 GZF1Q9H116 711 aaPredicted RBP21.67■■□□□ 1.06
TOP3A-213ENST00000582230 LAMA2P24043 3122 aaKnown RBP21.67■■□□□ 1.06
TOP3A-213ENST00000582230 CITO14578 2027 aa21.67■■□□□ 1.06
TOP3A-213ENST00000582230 SF3B1O75533 1304 aaKnown RBP eCLIP21.66■■□□□ 1.068e-6■■■■■ 107
TOP3A-213ENST00000582230 PTPRJQ12913 1337 aa21.66■■□□□ 1.06
TOP3A-213ENST00000582230 LRRIQ3A6PVS8 624 aaPredicted RBP21.66■■□□□ 1.06
TOP3A-213ENST00000582230 PIRO00625 290 aa21.66■■□□□ 1.06
TOP3A-213ENST00000582230 CCDC192P0DO97 292 aa21.66■■□□□ 1.06
TOP3A-213ENST00000582230 GUCY2FP51841 1108 aa21.66■■□□□ 1.06
TOP3A-213ENST00000582230 TPD52L1Q16890 204 aaPredicted RBP21.66■■□□□ 1.06
TOP3A-213ENST00000582230 LMBRD2Q68DH5 695 aaPredicted RBP21.66■■□□□ 1.06
TOP3A-213ENST00000582230 FUT10Q6P4F1 479 aa21.66■■□□□ 1.06
TOP3A-213ENST00000582230 FRMD5Q7Z6J6 570 aa21.66■■□□□ 1.06
TOP3A-213ENST00000582230 C1orf127Q8N9H9 656 aa21.66■■□□□ 1.06
TOP3A-213ENST00000582230 OR5B17Q8NGF7 314 aa21.66■■□□□ 1.06
TOP3A-213ENST00000582230 MED15Q96RN5 788 aa21.66■■□□□ 1.06
TOP3A-213ENST00000582230 MTMR10Q9NXD2 777 aa21.66■■□□□ 1.06
TOP3A-213ENST00000582230 ARMCX3Q9UH62 379 aaPredicted RBP21.66■■□□□ 1.06
TOP3A-213ENST00000582230 NUB1Q9Y5A7 615 aa21.66■■□□□ 1.06
TOP3A-213ENST00000582230 TDRD15B5MCY1 1934 aaKnown RBP21.66■■□□□ 1.06
TOP3A-213ENST00000582230 F8W810 466 aa21.65■■□□□ 1.06
TOP3A-213ENST00000582230 EFEMP2O95967 443 aa21.65■■□□□ 1.06
TOP3A-213ENST00000582230 POU3F3P20264 500 aaPredicted RBP21.65■■□□□ 1.06
TOP3A-213ENST00000582230 RBP5P82980 135 aa21.65■■□□□ 1.06
TOP3A-213ENST00000582230 VPS52Q8N1B4 723 aa21.65■■□□□ 1.06
TOP3A-213ENST00000582230 C3orf58Q8NDZ4 430 aa21.65■■□□□ 1.06
TOP3A-213ENST00000582230 HASPINQ8TF76 798 aa21.65■■□□□ 1.06
TOP3A-213ENST00000582230 ZNF516Q92618 1163 aa21.65■■□□□ 1.06
TOP3A-213ENST00000582230 MRPL38Q96DV4 380 aaKnown RBP21.65■■□□□ 1.06
TOP3A-213ENST00000582230 CDX2Q99626 313 aaPredicted RBP21.65■■□□□ 1.06
TOP3A-213ENST00000582230 NAT10Q9H0A0 1025 aaKnown RBP21.65■■□□□ 1.06
TOP3A-213ENST00000582230 TLR9Q9NR96 1032 aa21.65■■□□□ 1.06
TOP3A-213ENST00000582230 R3HCC1Q9Y3T6 440 aaKnown RBP21.65■■□□□ 1.06
TOP3A-213ENST00000582230 STX10O60499 249 aa21.64■■□□□ 1.05
TOP3A-213ENST00000582230 SOD2P04179 222 aa21.64■■□□□ 1.05
TOP3A-213ENST00000582230 ITGB3P05106 788 aa21.64■■□□□ 1.05
TOP3A-213ENST00000582230 DNAJB1P25685 340 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms