RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 DDIT3P35638 169 aa24.38■■□□□ 1.49
CASC3-207ENST00000581849 BRCC3P46736 316 aa24.38■■□□□ 1.49
CASC3-207ENST00000581849 LIG4P49917 911 aa24.38■■□□□ 1.49
CASC3-207ENST00000581849 VCPP55072 806 aaKnown RBP24.38■■□□□ 1.49
CASC3-207ENST00000581849 IER5LQ5T953 404 aa24.38■■□□□ 1.49
CASC3-207ENST00000581849 IRF2BPLQ9H1B7 796 aa24.38■■□□□ 1.49
CASC3-207ENST00000581849 CCDC39Q9UFE4 941 aa24.38■■□□□ 1.49
CASC3-207ENST00000581849 NUB1Q9Y5A7 615 aa24.38■■□□□ 1.49
CASC3-207ENST00000581849 SRPRBQ9Y5M8 271 aaKnown RBP24.38■■□□□ 1.49
CASC3-207ENST00000581849 CLIC4Q9Y696 253 aa24.38■■□□□ 1.49
CASC3-207ENST00000581849 WDFY4Q6ZS81 3184 aa24.38■■□□□ 1.49
CASC3-207ENST00000581849 TTC26A0AVF1 554 aa24.37■■□□□ 1.49
CASC3-207ENST00000581849 H7C4K7 107 aa24.37■■□□□ 1.49
CASC3-207ENST00000581849 HNRNPDLO14979 420 aaKnown RBP24.37■■□□□ 1.49
CASC3-207ENST00000581849 PDGFBP01127 241 aaPredicted RBP24.37■■□□□ 1.49
CASC3-207ENST00000581849 LAMP2P13473 410 aa24.37■■□□□ 1.49
CASC3-207ENST00000581849 MATR3P43243 847 aaKnown RBP eCLIP24.37■■□□□ 1.49
CASC3-207ENST00000581849 DHX8Q14562 1220 aaKnown RBP24.37■■□□□ 1.49
CASC3-207ENST00000581849 VARS2Q5ST30 1063 aaKnown RBP24.37■■□□□ 1.49
CASC3-207ENST00000581849 AXDND1Q5T1B0 1012 aaPredicted RBP24.37■■□□□ 1.49
CASC3-207ENST00000581849 SUSD3Q96L08 255 aa24.37■■□□□ 1.49
CASC3-207ENST00000581849 HAPLN2Q9GZV7 340 aa24.37■■□□□ 1.49
CASC3-207ENST00000581849 ST6GALNAC4Q9H4F1 302 aa24.37■■□□□ 1.49
CASC3-207ENST00000581849 FBXO2Q9UK22 296 aaPredicted RBP24.37■■□□□ 1.49
CASC3-207ENST00000581849 I3L4J1 428 aa24.36■■□□□ 1.49
CASC3-207ENST00000581849 TBC1D4O60343 1298 aa24.36■■□□□ 1.49
CASC3-207ENST00000581849 CXCL8P10145 99 aa24.36■■□□□ 1.49
CASC3-207ENST00000581849 CYP3A5P20815 502 aa24.36■■□□□ 1.49
CASC3-207ENST00000581849 FSHRP23945 695 aa24.36■■□□□ 1.49
CASC3-207ENST00000581849 LRPAP1P30533 357 aa24.36■■□□□ 1.49
CASC3-207ENST00000581849 CLCN5P51795 746 aa24.36■■□□□ 1.49
CASC3-207ENST00000581849 GTF2BQ00403 316 aa24.36■■□□□ 1.49
CASC3-207ENST00000581849 MRPL58Q14197 206 aaKnown RBP24.36■■□□□ 1.49
CASC3-207ENST00000581849 RSPO2Q6UXX9 243 aaPredicted RBP24.36■■□□□ 1.49
CASC3-207ENST00000581849 GET4Q7L5D6 327 aaPredicted RBP24.36■■□□□ 1.49
CASC3-207ENST00000581849 MAP4K3Q8IVH8 894 aa24.36■■□□□ 1.49
CASC3-207ENST00000581849 ZNF461Q8TAF7 563 aa24.36■■□□□ 1.49
CASC3-207ENST00000581849 SLC7A14Q8TBB6 771 aa24.36■■□□□ 1.49
CASC3-207ENST00000581849 C18orf25Q96B23 403 aaPredicted RBP24.36■■□□□ 1.49
CASC3-207ENST00000581849 FIZ1Q96SL8 496 aa24.36■■□□□ 1.49
CASC3-207ENST00000581849 ZSCAN16Q9H4T2 348 aaPredicted RBP24.36■■□□□ 1.49
CASC3-207ENST00000581849 UBQLN1Q9UMX0 589 aaKnown RBP24.36■■□□□ 1.49
CASC3-207ENST00000581849 ANHXE9PGG2 379 aa24.35■■□□□ 1.49
CASC3-207ENST00000581849 K7ELQ4 463 aaPredicted RBP24.35■■□□□ 1.49
CASC3-207ENST00000581849 OGTO15294 1046 aa24.35■■□□□ 1.49
CASC3-207ENST00000581849 XPOTO43592 962 aaKnown RBP24.35■■□□□ 1.49
CASC3-207ENST00000581849 FAM189A1O60320 539 aa24.35■■□□□ 1.49
CASC3-207ENST00000581849 ADRB2P07550 413 aa24.35■■□□□ 1.49
CASC3-207ENST00000581849 TXLNAP40222 546 aa24.35■■□□□ 1.49
CASC3-207ENST00000581849 PPP2R3AQ06190 1150 aa24.35■■□□□ 1.49
CASC3-207ENST00000581849 ZBTB6Q15916 424 aa24.35■■□□□ 1.49
CASC3-207ENST00000581849 SEZ6Q53EL9 994 aa24.35■■□□□ 1.49
CASC3-207ENST00000581849 GRASPQ7Z6J2 395 aaPredicted RBP24.35■■□□□ 1.49
CASC3-207ENST00000581849 CD302Q8IX05 232 aa24.35■■□□□ 1.49
CASC3-207ENST00000581849 KRI1Q8N9T8 703 aaKnown RBP24.35■■□□□ 1.49
CASC3-207ENST00000581849 APPL2Q8NEU8 664 aa24.35■■□□□ 1.49
CASC3-207ENST00000581849 EPSTI1Q96J88 318 aa24.35■■□□□ 1.49
CASC3-207ENST00000581849 WNT16Q9UBV4 365 aa24.35■■□□□ 1.49
CASC3-207ENST00000581849 CACNA1HO95180 2353 aa24.34■■□□□ 1.49
CASC3-207ENST00000581849 ABLIM3O94929 683 aa24.34■■□□□ 1.49
CASC3-207ENST00000581849 ROR1Q01973 937 aa24.34■■□□□ 1.49
CASC3-207ENST00000581849 ASTLQ6HA08 431 aaPredicted RBP24.34■■□□□ 1.49
CASC3-207ENST00000581849 MFSD1Q9H3U5 465 aa24.34■■□□□ 1.49
CASC3-207ENST00000581849 TUBGCP4Q9UGJ1 667 aa24.34■■□□□ 1.49
CASC3-207ENST00000581849 CDH7Q9ULB5 785 aa24.34■■□□□ 1.49
CASC3-207ENST00000581849 KCNH3Q9ULD8 1083 aa24.34■■□□□ 1.49
CASC3-207ENST00000581849 MAFFQ9ULX9 164 aa24.34■■□□□ 1.49
CASC3-207ENST00000581849 MTMR6Q9Y217 621 aa24.34■■□□□ 1.49
CASC3-207ENST00000581849 DOCK6Q96HP0 2047 aa24.34■■□□□ 1.49
CASC3-207ENST00000581849 A0A0B4J269 797 aa24.33■■□□□ 1.49
CASC3-207ENST00000581849 ARHGEF37A1IGU5 675 aa24.33■■□□□ 1.49
CASC3-207ENST00000581849 SRFP11831 508 aa24.33■■□□□ 1.49
CASC3-207ENST00000581849 PAX3P23760 479 aa24.33■■□□□ 1.49
CASC3-207ENST00000581849 MARCKSP29966 332 aaPredicted RBP24.33■■□□□ 1.49
CASC3-207ENST00000581849 MCM4P33991 863 aa24.33■■□□□ 1.49
CASC3-207ENST00000581849 POU5F1Q01860 360 aaKnown RBP24.33■■□□□ 1.49
CASC3-207ENST00000581849 TCF15Q12870 199 aa24.33■■□□□ 1.49
CASC3-207ENST00000581849 HTR4Q13639 388 aa24.33■■□□□ 1.49
CASC3-207ENST00000581849 TPGS2Q68CL5 300 aa24.33■■□□□ 1.49
CASC3-207ENST00000581849 ZNF280DQ6N043 979 aa24.33■■□□□ 1.49
CASC3-207ENST00000581849 USP49Q70CQ1 688 aa24.33■■□□□ 1.49
CASC3-207ENST00000581849 SLC44A3Q8N4M1 653 aa24.33■■□□□ 1.49
CASC3-207ENST00000581849 HVCN1Q96D96 273 aa24.33■■□□□ 1.49
CASC3-207ENST00000581849 OXCT2Q9BYC2 517 aaPredicted RBP24.33■■□□□ 1.49
CASC3-207ENST00000581849 ZHX3Q9H4I2 956 aa24.33■■□□□ 1.49
CASC3-207ENST00000581849 RPF1Q9H9Y2 349 aaKnown RBP24.33■■□□□ 1.49
CASC3-207ENST00000581849 AVENQ9NQS1 362 aaPredicted RBP24.33■■□□□ 1.49
CASC3-207ENST00000581849 SEL1LQ9UBV2 794 aa24.33■■□□□ 1.49
CASC3-207ENST00000581849 PCDHB8Q9UN66 801 aa24.33■■□□□ 1.49
CASC3-207ENST00000581849 CCL16O15467 120 aa24.32■■□□□ 1.48
CASC3-207ENST00000581849 ATF2P15336 505 aa24.32■■□□□ 1.48
CASC3-207ENST00000581849 ENOX2Q16206 610 aaKnown RBP24.32■■□□□ 1.48
CASC3-207ENST00000581849 SLFN12LQ6IEE8 588 aa24.32■■□□□ 1.48
CASC3-207ENST00000581849 KIF12Q96FN5 646 aa24.32■■□□□ 1.48
CASC3-207ENST00000581849 FBXL21Q9UKT6 434 aa24.32■■□□□ 1.48
CASC3-207ENST00000581849 WDR27A2RRH5 827 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 M0QZQ0 153 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 GALR2O43603 387 aaPredicted RBP24.31■■□□□ 1.48
CASC3-207ENST00000581849 STX6O43752 255 aa24.31■■□□□ 1.48
CASC3-207ENST00000581849 ELF1P32519 619 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms