RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 PALB2Q86YC2 1186 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 HSCBQ8IWL3 235 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 TMEM87AQ8NBN3 555 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 LINC00301Q8NCQ3 95 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 RASSF8Q8NHQ8 419 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 LARP4BQ92615 738 aaKnown RBP10.63□□□□□ -0.71
TOP3A-211ENST00000581536 STAMQ92783 540 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 CASP10Q92851 521 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 PPP1R10Q96QC0 940 aaKnown RBP10.63□□□□□ -0.71
TOP3A-211ENST00000581536 FIZ1Q96SL8 496 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 HERC2P3Q9BVR0 1158 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 C11orf16Q9NQ32 467 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 PRKAG3Q9UGI9 489 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 LIMD1Q9UGP4 676 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 ADAM28Q9UKQ2 775 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 FAM50BQ9Y247 325 aa10.63□□□□□ -0.71
TOP3A-211ENST00000581536 WDFY4Q6ZS81 3184 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 LOC730098B7Z3J9 87 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 ANKRD63C9JTQ0 380 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 I3L4J1 428 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 TRAK2O60296 914 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 FAM13AO94988 1023 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 KIF4AO95239 1232 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 KRT18P05783 430 aaKnown RBP10.62□□□□□ -0.71
TOP3A-211ENST00000581536 TNFSF9P41273 254 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 CLCN4P51793 760 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 ZNF131P52739 623 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 DSG1Q02413 1049 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 STRN3Q13033 797 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 SLC10A6Q3KNW5 377 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 ZNF568Q3ZCX4 644 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 XKR4Q5GH76 650 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 FAM171A1Q5VUB5 890 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 RRAGBQ5VZM2 374 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 MPZL3Q6UWV2 235 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 TMC5Q6UXY8 1006 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 CEP57Q86XR8 500 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 RNF135Q8IUD6 432 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 PDILTQ8N807 584 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 RIN2Q8WYP3 895 aaPredicted RBP10.62□□□□□ -0.71
TOP3A-211ENST00000581536 C18orf25Q96B23 403 aaPredicted RBP10.62□□□□□ -0.71
TOP3A-211ENST00000581536 CHAMP1Q96JM3 812 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 ACAP3Q96P50 834 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 KCND2Q9NZV8 630 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 TBC1D7Q9P0N9 293 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 ANKFY1Q9P2R3 1169 aa10.62□□□□□ -0.71
TOP3A-211ENST00000581536 CARNS1A5YM72 827 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 TISP43B9A030 160 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 ADAM12O43184 909 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 TOM1L1O75674 476 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 ZSCAN22P10073 491 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-211ENST00000581536 MCF2P10911 925 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 HOXB8P17481 243 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-211ENST00000581536 MATR3P43243 847 aaKnown RBP eCLIP10.61□□□□□ -0.71
TOP3A-211ENST00000581536 NASPP49321 788 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-211ENST00000581536 GLUD2P49448 558 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 CBX2Q14781 532 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-211ENST00000581536 STK38Q15208 465 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 UPP1Q16831 310 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 USP41Q3LFD5 358 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 RTP2Q5QGT7 225 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 ZBTB41Q5SVQ8 909 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 KIAA1841Q6NSI8 718 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 SLC39A4Q6P5W5 647 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 C3orf58Q8NDZ4 430 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 DNAJC19Q96DA6 116 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 FBXL18Q96ME1 805 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 CLSTN3Q9BQT9 956 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 LRFN3Q9BTN0 628 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 CCDC94Q9BW85 323 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-211ENST00000581536 PHF7Q9BWX1 381 aaPredicted RBP10.61□□□□□ -0.71
TOP3A-211ENST00000581536 EMILIN2Q9BXX0 1053 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 ADAM7Q9H2U9 754 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 POMKQ9H5K3 350 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 PARVGQ9HBI0 331 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 RXFP1Q9HBX9 757 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 LARSQ9P2J5 1176 aaKnown RBP10.61□□□□□ -0.71
TOP3A-211ENST00000581536 CCDC39Q9UFE4 941 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 MUTYHQ9UIF7 546 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 KCNG1Q9UIX4 513 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 ODF2LQ9ULJ1 636 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 TBX20Q9UMR3 447 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 NOTCH4Q99466 2003 aa10.61□□□□□ -0.71
TOP3A-211ENST00000581536 SCN1AP35498 2009 aa10.6□□□□□ -0.71
TOP3A-211ENST00000581536 RNF223E7ERA6 249 aa10.6□□□□□ -0.71
TOP3A-211ENST00000581536 K7ENM7 598 aa10.6□□□□□ -0.71
TOP3A-211ENST00000581536 SPTLC2O15270 562 aa10.6□□□□□ -0.71
TOP3A-211ENST00000581536 CLDN3O15551 220 aa10.6□□□□□ -0.71
TOP3A-211ENST00000581536 BRD1O95696 1058 aa10.6□□□□□ -0.71
TOP3A-211ENST00000581536 F13A1P00488 732 aa10.6□□□□□ -0.71
TOP3A-211ENST00000581536 URODP06132 367 aa10.6□□□□□ -0.71
TOP3A-211ENST00000581536 HSP90AA1P07900 732 aaKnown RBP10.6□□□□□ -0.71
TOP3A-211ENST00000581536 SRGAP2BP0DMP2 458 aa10.6□□□□□ -0.71
TOP3A-211ENST00000581536 BRCC3P46736 316 aa10.6□□□□□ -0.71
TOP3A-211ENST00000581536 MMP16P51512 607 aa10.6□□□□□ -0.71
TOP3A-211ENST00000581536 YARSP54577 528 aaKnown RBP10.6□□□□□ -0.71
TOP3A-211ENST00000581536 GTF2BQ00403 316 aa10.6□□□□□ -0.71
TOP3A-211ENST00000581536 MCL1Q07820 350 aa10.6□□□□□ -0.71
TOP3A-211ENST00000581536 KCNA1Q09470 495 aa10.6□□□□□ -0.71
TOP3A-211ENST00000581536 NOLC1Q14978 699 aaKnown RBP eCLIP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms