RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 TEX2Q8IWB9 1127 aa15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 CCSER1Q9C0I3 900 aa15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 CD248Q9HCU0 757 aa15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 ZC3H7BQ9UGR2 993 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 PDS5AQ29RF7 1337 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 SPAG6O75602 509 aa15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 FXR1P51114 621 aaKnown RBP eCLIP15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 GALNT4Q8N4A0 578 aa15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 TUBE1Q9UJT0 475 aa15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 USP42Q9H9J4 1324 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 ZFYVE19Q96K21 471 aa15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 NSMCE4AQ9NXX6 385 aa15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 TSR3Q9UJK0 312 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 TSC22D4Q9Y3Q8 395 aa15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 B2RBV5 119 aa15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 KIAA0391O15091 583 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 ADCY3O60266 1144 aa15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 PLA2G4AP47712 749 aa15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 OTUB1Q96FW1 271 aaPredicted RBP15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 MAP3K4Q9Y6R4 1608 aa15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 PNPLA7Q6ZV29 1317 aa15.28■□□□□ 0.04
CSNK1D-217ENST00000581241 GNAT1P11488 350 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 DEFA1P59665 94 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 DEFA3P59666 94 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 TRIP10Q15642 601 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 NUP93Q8N1F7 819 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 ASAP3Q8TDY4 903 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 OSBPL8Q9BZF1 889 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 TRIM9Q9C026 710 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 C20orf96Q9NUD7 363 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 GID8Q9NWU2 228 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 SMARCAL1Q9NZC9 954 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 HSPBP1Q9NZL4 362 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 MAGEA4P43358 317 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 ERFP50548 548 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 PIGHQ14442 188 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 EPHA7Q15375 998 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 NYAP1Q6ZVC0 841 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 PRUNE1Q86TP1 453 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 CPA5Q8WXQ8 436 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 SPATA17Q96L03 361 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 AFF4Q9UHB7 1163 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 PRPF4O43172 522 aaKnown RBP eCLIP15.27■□□□□ 0.041e-6■■■■■ 38.3
CSNK1D-217ENST00000581241 RECQLP46063 649 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 TMED10P49755 219 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 PCYOX1LQ8NBM8 494 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 NSUN6Q8TEA1 469 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 SCFD1Q8WVM8 642 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 TEKT4Q8WW24 435 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 MYO3BQ8WXR4 1341 aa15.27■□□□□ 0.04
CSNK1D-217ENST00000581241 PLEKHG2Q9H7P9 1386 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 SMAPO00193 183 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 ASNSP08243 561 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 IREB2P48200 963 aaKnown RBP15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 GRIN1Q05586 938 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 SCN4BQ8IWT1 228 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 MARCH10Q8NA82 808 aaPredicted RBP15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 OR6P1Q8NGX9 317 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 ZNF507Q8TCN5 953 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 PLEKHA5Q9HAU0 1116 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 DLGAP2Q9P1A6 1054 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 ARAP3Q8WWN8 1544 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 HMOX2P30519 316 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 ACTR2P61160 394 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 CYB5D1Q6P9G0 228 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 FAM196AQ6ZSG2 479 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 SETD3Q86TU7 594 aaPredicted RBP15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 TNIP2Q8NFZ5 429 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 FAM162AQ96A26 154 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 TMEM117Q9H0C3 514 aa15.27■□□□□ 0.03
CSNK1D-217ENST00000581241 A0A1B0GW55 424 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 DUX4L2P0CJ85 424 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 DUX4L3P0CJ86 424 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 DUX4L4P0CJ87 422 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 DUX4L5P0CJ88 424 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 DUX4L6P0CJ89 424 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 DUX4L7P0CJ90 424 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 FMO5P49326 533 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 ITGA8P53708 1063 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 HLFQ16534 295 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 WLSQ5T9L3 541 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 SRBD1Q8N5C6 995 aaKnown RBP15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 AFG1LQ8WV93 481 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 DUX4Q9UBX2 424 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 TET3O43151 1660 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 FAM95CA0A1B0GW59 222 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 UCHL3P15374 230 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 NMT1P30419 496 aaKnown RBP15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 BAG6P46379 1132 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 SESN2P58004 480 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 DUOXA2Q1HG44 320 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 QRICH1Q2TAL8 776 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 STOX1Q6ZVD7 989 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 SLC30A5Q8TAD4 765 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 CNBD2Q96M20 576 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 SERPINB12Q96P63 405 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 FBXO40Q9UH90 709 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 A8MXQ7 604 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 AIM2O14862 343 aa15.26■□□□□ 0.03
CSNK1D-217ENST00000581241 WEE2P0C1S8 567 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms