RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 GLRA4Q5JXX5 417 aa10.93□□□□□ -0.66
RFFL-208ENST00000581039 PRSS36Q5K4E3 855 aa10.93□□□□□ -0.66
RFFL-208ENST00000581039 SLC8B1Q6J4K2 584 aa10.93□□□□□ -0.66
RFFL-208ENST00000581039 POTEHQ6S545 545 aa10.93□□□□□ -0.66
RFFL-208ENST00000581039 CD300LGQ6UXG3 332 aa10.93□□□□□ -0.66
RFFL-208ENST00000581039 PDZD4Q76G19 769 aaPredicted RBP10.93□□□□□ -0.66
RFFL-208ENST00000581039 ZNF687Q8N1G0 1237 aa10.93□□□□□ -0.66
RFFL-208ENST00000581039 ELMOD1Q8N336 334 aa10.93□□□□□ -0.66
RFFL-208ENST00000581039 SMARCD2Q92925 531 aa10.93□□□□□ -0.66
RFFL-208ENST00000581039 DDX27Q96GQ7 796 aaKnown RBP10.93□□□□□ -0.66
RFFL-208ENST00000581039 PPP1R10Q96QC0 940 aaKnown RBP10.93□□□□□ -0.66
RFFL-208ENST00000581039 CYP4F11Q9HBI6 524 aa10.93□□□□□ -0.66
RFFL-208ENST00000581039 ZNF334Q9HCZ1 680 aaPredicted RBP10.93□□□□□ -0.66
RFFL-208ENST00000581039 TRPV5Q9NQA5 729 aa10.93□□□□□ -0.66
RFFL-208ENST00000581039 ORC3Q9UBD5 711 aaPredicted RBP10.93□□□□□ -0.66
RFFL-208ENST00000581039 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.93□□□□□ -0.66
RFFL-208ENST00000581039 KMT2BQ9UMN6 2715 aaPredicted RBP10.93□□□□□ -0.66
RFFL-208ENST00000581039 SMIM28A0A1B0GU29 152 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 ZNF263O14978 683 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 DTNBO60941 627 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 SPATA31C1P0DKV0 1188 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 ATF2P15336 505 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 CYP11B2P19099 503 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 FCARP24071 287 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 NAMPTP43490 491 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 BRCC3P46736 316 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 EFNA5P52803 228 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 YARSP54577 528 aaKnown RBP10.92□□□□□ -0.66
RFFL-208ENST00000581039 PPP2R5AQ15172 486 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 EEF1DP3Q658K8 133 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 IQCEQ6IPM2 695 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 PADI6Q6TGC4 694 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 CATSPER3Q86XQ3 398 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 MAP4K3Q8IVH8 894 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 TCEAL8Q8IYN2 117 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 BSNDQ8WZ55 320 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 TNFRSF25Q93038 417 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 TCEAL4Q96EI5 215 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 ZNF512Q96ME7 567 aaPredicted RBP10.92□□□□□ -0.66
RFFL-208ENST00000581039 ASB16Q96NS5 453 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 MTMR9Q96QG7 549 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 TUFT1Q9NNX1 390 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 SEMA4GQ9NTN9 838 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 PIAS3Q9Y6X2 628 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 F5P12259 2224 aa10.92□□□□□ -0.66
RFFL-208ENST00000581039 PATJQ8NI35 1801 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 WDR27A2RRH5 827 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 ARHGEF35A5YM69 484 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 H7C4K7 107 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 FOXD2O60548 495 aaPredicted RBP10.91□□□□□ -0.66
RFFL-208ENST00000581039 PFKFB2O60825 505 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 CNR2P34972 360 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 VIPR2P41587 438 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 CSRP2Q16527 193 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 ATF7IP2Q5U623 682 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 TPGS2Q68CL5 300 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 VITQ6UXI7 678 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 C3orf58Q8NDZ4 430 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 DEPDC1BQ8WUY9 529 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 IFT74Q96LB3 600 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 ZSWIM3Q96MP5 696 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 POLR3CQ9BUI4 534 aaPredicted RBP10.91□□□□□ -0.66
RFFL-208ENST00000581039 CCDC94Q9BW85 323 aaPredicted RBP10.91□□□□□ -0.66
RFFL-208ENST00000581039 CCDC113Q9H0I3 377 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 GOLGA2P5Q9HBQ8 144 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 TOPORSQ9NS56 1045 aaPredicted RBP10.91□□□□□ -0.66
RFFL-208ENST00000581039 SLC38A7Q9NVC3 462 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 TPCN1Q9ULQ1 816 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 INSL5Q9Y5Q6 135 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 ARID2Q68CP9 1835 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 NOTCH4Q99466 2003 aa10.91□□□□□ -0.66
RFFL-208ENST00000581039 BTBD18B2RXH4 712 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 CHURC1-FNTBB4DL54 471 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 K7ERI5 159 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 PODXLO00592 558 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 SYN3O14994 580 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 HRO43593 1189 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 MED24O75448 989 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 CTDNEP1O95476 244 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 SEC24AO95486 1093 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 EDN1P05305 212 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 CHRNB1P11230 501 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 MYL4P12829 197 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 CCNE1P24864 410 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 CCR2P41597 374 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 FNTBP49356 437 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 MLLT6P55198 1093 aaPredicted RBP10.9□□□□□ -0.66
RFFL-208ENST00000581039 SATB1Q01826 763 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 CTXN3Q4LDR2 81 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 NT5DC1Q5TFE4 455 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 C1orf228Q6PIY5 440 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 PRR23CQ6ZRP0 262 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.9□□□□□ -0.66
RFFL-208ENST00000581039 MFSD6LQ8IWD5 586 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 YAF2Q8IY57 180 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 SPEM1Q8N4L4 309 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 LEMD2Q8NC56 503 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 ERMNQ8TAM6 284 aa10.9□□□□□ -0.66
RFFL-208ENST00000581039 ZSCAN18Q8TBC5 510 aaPredicted RBP10.9□□□□□ -0.66
RFFL-208ENST00000581039 CSGALNACT1Q8TDX6 532 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms