RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 CPSF3Q9UKF6 684 aaKnown RBP13.71□□□□□ -0.21
CBX1-206ENST00000581003 CCDC195A0A1B0GUA6 201 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 POLR2DO15514 142 aaKnown RBP13.7□□□□□ -0.22
CBX1-206ENST00000581003 N4BP1O75113 896 aaKnown RBP13.7□□□□□ -0.22
CBX1-206ENST00000581003 PRPF6O94906 941 aaKnown RBP13.7□□□□□ -0.22
CBX1-206ENST00000581003 ASGR2P07307 311 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 OR1D2P34982 312 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 PPP2R3AQ06190 1150 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 ZBTB6Q15916 424 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 HERC4Q5GLZ8 1057 aaPredicted RBP13.7□□□□□ -0.22
CBX1-206ENST00000581003 RESP18Q5W5W9 173 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 ADALQ6DHV7 355 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 JADE1Q6IE81 842 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 CRELD2Q6UXH1 353 aaPredicted RBP13.7□□□□□ -0.22
CBX1-206ENST00000581003 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.7□□□□□ -0.22
CBX1-206ENST00000581003 KCNG4Q8TDN1 519 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 UROC1Q96N76 676 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 TRIM9Q9C026 710 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 SLC38A7Q9NVC3 462 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 KBTBD4Q9NVX7 518 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 FNIP2Q9P278 1114 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 MTRRQ9UBK8 725 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 TIMM13Q9Y5L4 95 aaPredicted RBP13.7□□□□□ -0.22
CBX1-206ENST00000581003 CDY1Q9Y6F8 540 aa13.7□□□□□ -0.22
CBX1-206ENST00000581003 GOLGA8IPA6NC78 632 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 GOLGA8JA6NMD2 632 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 GAP43P17677 238 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 HOXD13P35453 343 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 CDR1P51861 262 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 NTHL1P78549 312 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 VARS2Q5ST30 1063 aaKnown RBP13.69□□□□□ -0.22
CBX1-206ENST00000581003 L1TD1Q5T7N2 865 aaKnown RBP13.69□□□□□ -0.22
CBX1-206ENST00000581003 KREMEN2Q8NCW0 462 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 LEO1Q8WVC0 666 aaPredicted RBP13.69□□□□□ -0.22
CBX1-206ENST00000581003 RIPOR3Q96MK2 946 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 CBWD1Q9BRT8 395 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 RPF1Q9H9Y2 349 aaKnown RBP13.69□□□□□ -0.22
CBX1-206ENST00000581003 GDPD2Q9HCC8 539 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.69□□□□□ -0.22
CBX1-206ENST00000581003 KCNG1Q9UIX4 513 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 FBXW11Q9UKB1 542 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 RCOR1Q9UKL0 485 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 SSX2IPQ9Y2D8 614 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 STYXL1Q9Y6J8 313 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 TRIOO75962 3097 aa13.69□□□□□ -0.22
CBX1-206ENST00000581003 TULP1O00294 542 aaPredicted RBP13.68□□□□□ -0.22
CBX1-206ENST00000581003 SPTLC1O15269 473 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 MCM4P33991 863 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 MTHFRP42898 656 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 AFMP43652 599 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 ARPP19P56211 112 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 ASIC1P78348 528 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 TMEM31Q5JXX7 168 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 ATAT1Q5SQI0 421 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 EFCAB13Q8IY85 973 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 POMGNT1Q8WZA1 660 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 SMG7Q92540 1137 aaKnown RBP13.68□□□□□ -0.22
CBX1-206ENST00000581003 FAM213AQ9BRX8 229 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 C1QTNF1Q9BXJ1 281 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 TNMDQ9H2S6 317 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 PCIF1Q9H4Z3 704 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 OLFML3Q9NRN5 406 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 SEL1LQ9UBV2 794 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 SERTAD1Q9UHV2 236 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 AGO2Q9UKV8 859 aaKnown RBP13.68□□□□□ -0.22
CBX1-206ENST00000581003 NUB1Q9Y5A7 615 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 CITO14578 2027 aa13.68□□□□□ -0.22
CBX1-206ENST00000581003 ANK1P16157 1881 aa13.67□□□□□ -0.22
CBX1-206ENST00000581003 A0A1B0GVL5 298 aa13.67□□□□□ -0.22
CBX1-206ENST00000581003 ACTN4O43707 911 aaKnown RBP13.67□□□□□ -0.22
CBX1-206ENST00000581003 C8AP07357 584 aa13.67□□□□□ -0.22
CBX1-206ENST00000581003 ADRB2P07550 413 aa13.67□□□□□ -0.22
CBX1-206ENST00000581003 COL9A1P20849 921 aa13.67□□□□□ -0.22
CBX1-206ENST00000581003 ROR1Q01973 937 aa13.67□□□□□ -0.22
CBX1-206ENST00000581003 ELAVL2Q12926 359 aaKnown RBP13.67□□□□□ -0.22
CBX1-206ENST00000581003 CUL4BQ13620 913 aa13.67□□□□□ -0.22
CBX1-206ENST00000581003 TDRD5Q8NAT2 981 aaKnown RBP13.67□□□□□ -0.22
CBX1-206ENST00000581003 SLC7A14Q8TBB6 771 aa13.67□□□□□ -0.22
CBX1-206ENST00000581003 NOC3LQ8WTT2 800 aaKnown RBP13.67□□□□□ -0.22
CBX1-206ENST00000581003 HVCN1Q96D96 273 aa13.67□□□□□ -0.22
CBX1-206ENST00000581003 SUSD3Q96L08 255 aa13.67□□□□□ -0.22
CBX1-206ENST00000581003 NECTIN4Q96NY8 510 aa13.67□□□□□ -0.22
CBX1-206ENST00000581003 ACCSQ96QU6 501 aa13.67□□□□□ -0.22
CBX1-206ENST00000581003 PLEKHA5Q9HAU0 1116 aa13.67□□□□□ -0.22
CBX1-206ENST00000581003 HCFC1R1Q9NWW0 138 aa13.67□□□□□ -0.22
CBX1-206ENST00000581003 TSC2P49815 1807 aa13.67□□□□□ -0.22
CBX1-206ENST00000581003 CLUHO75153 1309 aa13.66□□□□□ -0.22
CBX1-206ENST00000581003 PTPRJQ12913 1337 aa13.66□□□□□ -0.22
CBX1-206ENST00000581003 WDR27A2RRH5 827 aa13.66□□□□□ -0.22
CBX1-206ENST00000581003 NRG2O14511 850 aaPredicted RBP13.66□□□□□ -0.22
CBX1-206ENST00000581003 CCL16O15467 120 aa13.66□□□□□ -0.22
CBX1-206ENST00000581003 TBC1D4O60343 1298 aa13.66□□□□□ -0.22
CBX1-206ENST00000581003 GPR37L1O60883 481 aa13.66□□□□□ -0.22
CBX1-206ENST00000581003 ZMYND10O75800 440 aa13.66□□□□□ -0.22
CBX1-206ENST00000581003 OR4Q2P0C623 313 aa13.66□□□□□ -0.22
CBX1-206ENST00000581003 ALADP13716 330 aa13.66□□□□□ -0.22
CBX1-206ENST00000581003 PFKFB1P16118 471 aa13.66□□□□□ -0.22
CBX1-206ENST00000581003 LRPAP1P30533 357 aa13.66□□□□□ -0.22
CBX1-206ENST00000581003 RPL9P32969 192 aaKnown RBP13.66□□□□□ -0.22
CBX1-206ENST00000581003 RAB33AQ14088 237 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms