RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 LRWD1Q9UFC0 647 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 MAFFQ9ULX9 164 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 MTF2Q9Y483 593 aaPredicted RBP11.28□□□□□ -0.6
GGA3-210ENST00000580799 RBM19Q9Y4C8 960 aaKnown RBP11.28□□□□□ -0.6
GGA3-210ENST00000580799 FRYLO94915 3013 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 DMXL1Q9Y485 3027 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 TRIP11Q15643 1979 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 WDR27A2RRH5 827 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 I3L4J1 428 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 ZNF197O14709 1029 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 MCF2P10911 925 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 KCNE1P15382 129 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 CD72P21854 359 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 IGFBP6P24592 240 aaPredicted RBP11.27□□□□□ -0.61
GGA3-210ENST00000580799 TARSP26639 723 aaKnown RBP11.27□□□□□ -0.61
GGA3-210ENST00000580799 RPL9P32969 192 aaKnown RBP11.27□□□□□ -0.61
GGA3-210ENST00000580799 BRCC3P46736 316 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 NPTX2P47972 431 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 PEX3P56589 373 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 GUCY1B3Q02153 619 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 SOX4Q06945 474 aaPredicted RBP11.27□□□□□ -0.61
GGA3-210ENST00000580799 ADCY1Q08828 1119 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 DMP1Q13316 513 aaPredicted RBP11.27□□□□□ -0.61
GGA3-210ENST00000580799 GNL2Q13823 731 aaKnown RBP11.27□□□□□ -0.61
GGA3-210ENST00000580799 ZNF174Q15697 407 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 TTC38Q5R3I4 469 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 VARS2Q5ST30 1063 aaKnown RBP11.27□□□□□ -0.61
GGA3-210ENST00000580799 TPGS2Q68CL5 300 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 ELMOD1Q8N336 334 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 DCLK2Q8N568 766 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 NELL1Q92832 810 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 DRC1Q96MC2 740 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 ACO2Q99798 780 aaKnown RBP11.27□□□□□ -0.61
GGA3-210ENST00000580799 IER2Q9BTL4 223 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 MRPL4Q9BYD3 311 aaKnown RBP11.27□□□□□ -0.61
GGA3-210ENST00000580799 EPC1Q9H2F5 836 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 TMEM134Q9H6X4 195 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 C17orf75Q9HAS0 396 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 PTPRHQ9HD43 1115 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 NOL7Q9UMY1 257 aaKnown RBP11.27□□□□□ -0.61
GGA3-210ENST00000580799 KIAA1024Q9UPX6 916 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 NUB1Q9Y5A7 615 aa11.27□□□□□ -0.61
GGA3-210ENST00000580799 CACNA1IQ9P0X4 2223 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 MED19A0JLT2 244 aaPredicted RBP11.26□□□□□ -0.61
GGA3-210ENST00000580799 CCDC169A6NNP5 214 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 PODXLO00592 558 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 MAN2B1O00754 1011 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 TBC1D4O60343 1298 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 LILRB5O75023 590 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 CEBPBP17676 345 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 ST3GAL1Q11201 340 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 MRPL58Q14197 206 aaKnown RBP11.26□□□□□ -0.61
GGA3-210ENST00000580799 ECM1Q16610 540 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 PRSS36Q5K4E3 855 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 TANGO2Q6ICL3 276 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 MAMSTRQ6ZN01 415 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 PDZD4Q76G19 769 aaPredicted RBP11.26□□□□□ -0.61
GGA3-210ENST00000580799 C4orf32Q8N8J7 132 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 CEP120Q8N960 986 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 IGSF22Q8N9C0 903 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 LEMD2Q8NC56 503 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 FBXO18Q8NFZ0 1043 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 IRF7Q92985 503 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 ACAP3Q96P50 834 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 CORO1BQ9BR76 489 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 TCHPQ9BT92 498 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 TRMT61BQ9BVS5 477 aaKnown RBP11.26□□□□□ -0.61
GGA3-210ENST00000580799 CYP4F11Q9HBI6 524 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 ZFP14Q9HCL3 533 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 TRPV5Q9NQA5 729 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 KMT5AQ9NQR1 393 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 PRMT8Q9NR22 394 aaPredicted RBP11.26□□□□□ -0.61
GGA3-210ENST00000580799 HEBP1Q9NRV9 189 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 DDX19AQ9NUU7 478 aaKnown RBP11.26□□□□□ -0.61
GGA3-210ENST00000580799 CNTN3Q9P232 1028 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 ARHGAP28Q9P2N2 729 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 KCNG1Q9UIX4 513 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 LIMCH1Q9UPQ0 1083 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 DNM3Q9UQ16 869 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 INSL5Q9Y5Q6 135 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.26□□□□□ -0.61
GGA3-210ENST00000580799 COL4A2P08572 1712 aa11.26□□□□□ -0.61
GGA3-210ENST00000580799 CITO14578 2027 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 LAD1O00515 517 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 PROZP22891 400 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 FCARP24071 287 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 NRLP54845 237 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 ARPP19P56211 112 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 OSTNP61366 133 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 HMGN5P82970 282 aaKnown RBP11.25□□□□□ -0.61
GGA3-210ENST00000580799 FZD5Q13467 585 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 PPP2R5DQ14738 602 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 CTXN3Q4LDR2 81 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 FAM78AQ5JUQ0 283 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 CYP4A22Q5TCH4 519 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 IQCEQ6IPM2 695 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 ZNF280DQ6N043 979 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 MPZL3Q6UWV2 235 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 DAW1Q8N136 415 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 APPL2Q8NEU8 664 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms