RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 ANO6Q4KMQ2 910 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 LRSAM1Q6UWE0 723 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 LRRC55Q6ZSA7 311 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 C11orf57Q6ZUT1 292 aaPredicted RBP13.19□□□□□ -0.3
CCDC84-209ENST00000580556 ZBTB33Q86T24 672 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 ENOX1Q8TC92 643 aaKnown RBP13.19□□□□□ -0.3
CCDC84-209ENST00000580556 ZNF689Q96CS4 500 aaPredicted RBP13.19□□□□□ -0.3
CCDC84-209ENST00000580556 CEP63Q96MT8 703 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 MED15Q96RN5 788 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 CCDC94Q9BW85 323 aaPredicted RBP13.19□□□□□ -0.3
CCDC84-209ENST00000580556 DNAJC25Q9H1X3 360 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 NXF3Q9H4D5 531 aaKnown RBP13.19□□□□□ -0.3
CCDC84-209ENST00000580556 TOPORSQ9NS56 1045 aaPredicted RBP13.19□□□□□ -0.3
CCDC84-209ENST00000580556 CPSF3Q9UKF6 684 aaKnown RBP13.19□□□□□ -0.3
CCDC84-209ENST00000580556 GIT1Q9Y2X7 761 aa13.19□□□□□ -0.3
CCDC84-209ENST00000580556 MRPL42Q9Y6G3 142 aaKnown RBP13.19□□□□□ -0.3
CCDC84-209ENST00000580556 CETN3O15182 167 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 CLIC2O15247 247 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 EXOC3O60645 756 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 STAG3L1P0CL83 205 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 HARSP12081 509 aaKnown RBP13.18□□□□□ -0.3
CCDC84-209ENST00000580556 ITGA4P13612 1032 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 CYP2J2P51589 502 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 MCCD1P59942 119 aaPredicted RBP13.18□□□□□ -0.3
CCDC84-209ENST00000580556 MYL5Q02045 173 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 ADAM9Q13443 819 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 SNRNP35Q16560 246 aaKnown RBP13.18□□□□□ -0.3
CCDC84-209ENST00000580556 CRELD2Q6UXH1 353 aaPredicted RBP13.18□□□□□ -0.3
CCDC84-209ENST00000580556 BRSK2Q8IWQ3 736 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 CD302Q8IX05 232 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 CSGALNACT2Q8N6G5 542 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 EFHBQ8N7U6 833 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 SPPL3Q8TCT6 385 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 NOC3LQ8WTT2 800 aaKnown RBP13.18□□□□□ -0.3
CCDC84-209ENST00000580556 TSPAN18Q96SJ8 248 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 DUSP9Q99956 384 aaKnown RBP13.18□□□□□ -0.3
CCDC84-209ENST00000580556 GZF1Q9H116 711 aaPredicted RBP13.18□□□□□ -0.3
CCDC84-209ENST00000580556 PLEKHA5Q9HAU0 1116 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 FRMD4BQ9Y2L6 1034 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 RWDD3Q9Y3V2 267 aa13.18□□□□□ -0.3
CCDC84-209ENST00000580556 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.18□□□□□ -0.3
CCDC84-209ENST00000580556 TTC3P53804 2025 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 PLXNA4Q9HCM2 1894 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 ZNF233A6NK53 670 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 IKBKBO14920 756 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 PER2O15055 1255 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 DGKIO75912 1065 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 RECQL4O94761 1208 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 GNA14O95837 355 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 PSMC2P35998 433 aaKnown RBP13.17□□□□□ -0.3
CCDC84-209ENST00000580556 ZNF165P49910 485 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 YARSP54577 528 aaKnown RBP13.17□□□□□ -0.3
CCDC84-209ENST00000580556 STX17P56962 302 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 ENOX2Q16206 610 aaKnown RBP13.17□□□□□ -0.3
CCDC84-209ENST00000580556 XKR4Q5GH76 650 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 ZBTB41Q5SVQ8 909 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 SPATA1Q5VX52 437 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 AGMOQ6ZNB7 445 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 THNSL1Q8IYQ7 743 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 CEP120Q8N960 986 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 KLHL23Q8NBE8 558 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 VN1R2Q8NFZ6 395 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 SAAL1Q96ER3 474 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 ACAP3Q96P50 834 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 FAM213AQ9BRX8 229 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 PHF7Q9BWX1 381 aaPredicted RBP13.17□□□□□ -0.3
CCDC84-209ENST00000580556 PCIF1Q9H4Z3 704 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 RSAD1Q9HA92 442 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 SNTG2Q9NY99 539 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 LRFN2Q9ULH4 789 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 HES2Q9Y543 173 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 PCDHB7Q9Y5E2 793 aa13.17□□□□□ -0.3
CCDC84-209ENST00000580556 TTC26A0AVF1 554 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 PRR23AA6NEV1 266 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 PROB1E7EW31 1015 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 AKAP3O75969 853 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 IL18RAPO95256 599 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 EPB41P11171 864 aaKnown RBP13.16□□□□□ -0.3
CCDC84-209ENST00000580556 SP100P23497 879 aaPredicted RBP13.16□□□□□ -0.3
CCDC84-209ENST00000580556 ACOT2P49753 483 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 GATMP50440 423 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 MARSP56192 900 aaKnown RBP13.16□□□□□ -0.3
CCDC84-209ENST00000580556 SURF1Q15526 300 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 SLC10A6Q3KNW5 377 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 PAN2Q504Q3 1202 aaKnown RBP13.16□□□□□ -0.3
CCDC84-209ENST00000580556 GLB1LQ6UWU2 654 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 ALKAL1Q6UXT8 129 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 INTS8Q75QN2 995 aaKnown RBP13.16□□□□□ -0.3
CCDC84-209ENST00000580556 FILIP1Q7Z7B0 1213 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 USP37Q86T82 979 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 CBWD2Q8IUF1 395 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 POF1BQ8WVV4 589 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 PLVAPQ9BX97 442 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 RNF39Q9H2S5 420 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 TSPY26PQ9H489 355 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 THAP9Q9H5L6 903 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 ASB7Q9H672 318 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 RPF1Q9H9Y2 349 aaKnown RBP13.16□□□□□ -0.3
CCDC84-209ENST00000580556 METTL14Q9HCE5 456 aaKnown RBP13.16□□□□□ -0.3
CCDC84-209ENST00000580556 RBAKQ9NYW8 714 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms