RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 MRPS23Q9Y3D9 190 aaKnown RBP21.33■■□□□ 1.01
LIMD2-209ENST00000580222 ANKRD11Q6UB99 2663 aaPredicted RBP21.32■■□□□ 1
LIMD2-209ENST00000580222 CASTOR2A6NHX0 329 aa21.32■■□□□ 1
LIMD2-209ENST00000580222 LAD1O00515 517 aa21.32■■□□□ 1
LIMD2-209ENST00000580222 LRP3O75074 770 aa21.32■■□□□ 1
LIMD2-209ENST00000580222 POU2F2P09086 479 aa21.32■■□□□ 1
LIMD2-209ENST00000580222 CEBPBP17676 345 aa21.32■■□□□ 1
LIMD2-209ENST00000580222 AXLP30530 894 aa21.32■■□□□ 1
LIMD2-209ENST00000580222 RFC5P40937 340 aa21.32■■□□□ 1
LIMD2-209ENST00000580222 NRLP54845 237 aa21.32■■□□□ 1
LIMD2-209ENST00000580222 MBTD1Q05BQ5 628 aa21.32■■□□□ 1
LIMD2-209ENST00000580222 GRIK3Q13003 919 aa21.32■■□□□ 1
LIMD2-209ENST00000580222 ASAP3Q8TDY4 903 aa21.32■■□□□ 1
LIMD2-209ENST00000580222 HAS1Q92839 578 aa21.32■■□□□ 1
LIMD2-209ENST00000580222 CLIC4Q9Y696 253 aa21.32■■□□□ 1
LIMD2-209ENST00000580222 F5P12259 2224 aa21.32■■□□□ 1
LIMD2-209ENST00000580222 CHURC1-FNTBB4DL54 471 aa21.31■■□□□ 1
LIMD2-209ENST00000580222 INO80B-WBP1J3KQ70 363 aa21.31■■□□□ 1
LIMD2-209ENST00000580222 TM4SF5O14894 197 aa21.31■■□□□ 1
LIMD2-209ENST00000580222 NPTXRO95502 500 aa21.31■■□□□ 1
LIMD2-209ENST00000580222 RHOP08100 348 aa21.31■■□□□ 1
LIMD2-209ENST00000580222 OR1D2P34982 312 aa21.31■■□□□ 1
LIMD2-209ENST00000580222 TXKP42681 527 aa21.31■■□□□ 1
LIMD2-209ENST00000580222 FNTBP49356 437 aa21.31■■□□□ 1
LIMD2-209ENST00000580222 ATP2C1P98194 919 aaPredicted RBP21.31■■□□□ 1
LIMD2-209ENST00000580222 DNM1Q05193 864 aaKnown RBP21.31■■□□□ 1
LIMD2-209ENST00000580222 RAB33AQ14088 237 aa21.31■■□□□ 1
LIMD2-209ENST00000580222 SIM2Q14190 667 aaPredicted RBP21.31■■□□□ 1
LIMD2-209ENST00000580222 MTMR9Q96QG7 549 aa21.31■■□□□ 1
LIMD2-209ENST00000580222 RXFP3Q9NSD7 469 aa21.31■■□□□ 1
LIMD2-209ENST00000580222 RGL1Q9NZL6 768 aa21.31■■□□□ 1
LIMD2-209ENST00000580222 PARP2Q9UGN5 583 aa21.31■■□□□ 1
LIMD2-209ENST00000580222 ASAP2O43150 1006 aa21.3■■□□□ 1
LIMD2-209ENST00000580222 STK38Q15208 465 aa21.3■■□□□ 1
LIMD2-209ENST00000580222 ATL3Q6DD88 541 aa21.3■■□□□ 1
LIMD2-209ENST00000580222 C4orf32Q8N8J7 132 aa21.3■■□□□ 1
LIMD2-209ENST00000580222 ELSPBP1Q96BH3 223 aa21.3■■□□□ 1
LIMD2-209ENST00000580222 TCEAL4Q96EI5 215 aa21.3■■□□□ 1
LIMD2-209ENST00000580222 TTC12Q9H892 705 aaPredicted RBP21.3■■□□□ 1
LIMD2-209ENST00000580222 C2orf42Q9NWW7 574 aa21.3■■□□□ 1
LIMD2-209ENST00000580222 GDE1Q9NZC3 331 aa21.3■■□□□ 1
LIMD2-209ENST00000580222 TFIP11Q9UBB9 837 aaKnown RBP21.3■■□□□ 1
LIMD2-209ENST00000580222 PCDHA12Q9UN75 941 aa21.3■■□□□ 1
LIMD2-209ENST00000580222 PTGESO14684 152 aa21.29■■□□□ 1
LIMD2-209ENST00000580222 NASPP49321 788 aaPredicted RBP21.29■■□□□ 1
LIMD2-209ENST00000580222 KRT85P78386 507 aa21.29■■□□□ 1
LIMD2-209ENST00000580222 SHC2P98077 582 aa21.29■■□□□ 1
LIMD2-209ENST00000580222 PPP2R5CQ13362 524 aa21.29■■□□□ 1
LIMD2-209ENST00000580222 TUSC3Q13454 348 aa21.29■■□□□ 1
LIMD2-209ENST00000580222 CAPSQ13938 189 aa21.29■■□□□ 1
LIMD2-209ENST00000580222 NAB2Q15742 525 aa21.29■■□□□ 1
LIMD2-209ENST00000580222 UVSSAQ2YD98 709 aa21.29■■□□□ 1
LIMD2-209ENST00000580222 FAM78AQ5JUQ0 283 aa21.29■■□□□ 1
LIMD2-209ENST00000580222 IFNLR1Q8IU57 520 aaPredicted RBP21.29■■□□□ 1
LIMD2-209ENST00000580222 DNASE1L2Q92874 299 aa21.29■■□□□ 1
LIMD2-209ENST00000580222 TRIM6Q9C030 488 aaPredicted RBP21.29■■□□□ 1
LIMD2-209ENST00000580222 P4HBP07237 508 aaKnown RBP21.28■■□□□ 1
LIMD2-209ENST00000580222 CHRNB1P11230 501 aa21.28■■□□□ 1
LIMD2-209ENST00000580222 YWHABP31946 246 aaKnown RBP21.28■■□□□ 1
LIMD2-209ENST00000580222 PRPHP41219 470 aa21.28■■□□□ 1
LIMD2-209ENST00000580222 SF3A2Q15428 464 aaKnown RBP21.28■■□□□ 1
LIMD2-209ENST00000580222 WDR44Q5JSH3 913 aa21.28■■□□□ 1
LIMD2-209ENST00000580222 NCAPH2Q6IBW4 605 aa21.28■■□□□ 1
LIMD2-209ENST00000580222 MAP4K3Q8IVH8 894 aa21.28■■□□□ 1
LIMD2-209ENST00000580222 TCP11Q8WWU5 503 aa21.28■■□□□ 1
LIMD2-209ENST00000580222 ZSWIM3Q96MP5 696 aa21.28■■□□□ 1
LIMD2-209ENST00000580222 BRD9Q9H8M2 597 aa21.28■■□□□ 1
LIMD2-209ENST00000580222 CFAP45Q9UL16 551 aa21.28■■□□□ 1
LIMD2-209ENST00000580222 NCANO14594 1321 aa21.28■■□□□ 1
LIMD2-209ENST00000580222 A0A1B0GUA9 196 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 TTLL13PA6NNM8 815 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 K7ESF4 209 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 MAN2B1O00754 1011 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 YEATS4O95619 227 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 CCR2P41597 374 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 CXCL12P48061 93 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 CCR3P51677 355 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 PTPAQ15257 358 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 CCDC6Q16204 474 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 XKR9Q5GH70 373 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 ARL6IP4Q66PJ3 421 aaKnown RBP21.27■■□□□ 1
LIMD2-209ENST00000580222 SLC27A1Q6PCB7 646 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 CD300LGQ6UXG3 332 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 DTHD1Q6ZMT9 781 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 C4orf19Q8IY42 314 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 EXOC8Q8IYI6 725 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 FAM3CQ92520 227 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 LXNQ9BS40 222 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 RBM12Q9NTZ6 932 aaKnown RBP21.27■■□□□ 1
LIMD2-209ENST00000580222 PPME1Q9Y570 386 aa21.27■■□□□ 1
LIMD2-209ENST00000580222 LAMA1P25391 3075 aa21.27■□□□□ 0.99
LIMD2-209ENST00000580222 NCBP1Q09161 790 aaKnown RBP21.26■□□□□ 0.99
LIMD2-209ENST00000580222 CTTNQ14247 550 aaKnown RBP21.26■□□□□ 0.99
LIMD2-209ENST00000580222 SLC39A14Q15043 492 aa21.26■□□□□ 0.99
LIMD2-209ENST00000580222 PCBP1Q15365 356 aaKnown RBP eCLIP21.26■□□□□ 0.99
LIMD2-209ENST00000580222 PRSS36Q5K4E3 855 aa21.26■□□□□ 0.99
LIMD2-209ENST00000580222 HEATR6Q6AI08 1181 aaKnown RBP21.26■□□□□ 0.99
LIMD2-209ENST00000580222 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.26■□□□□ 0.99
LIMD2-209ENST00000580222 FAM160A2Q8N612 972 aaPredicted RBP21.26■□□□□ 0.99
LIMD2-209ENST00000580222 LINC00301Q8NCQ3 95 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms