RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 CBWD1Q9BRT8 395 aa20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 S1PR5Q9H228 398 aa20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 RXFP1Q9HBX9 757 aa20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 SSX2IPQ9Y2D8 614 aa20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 PVALEFA0A1B0GWK0 134 aa20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 PRR29P0C7W0 189 aa20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 CLCN4P51793 760 aa20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 POSTNQ15063 836 aa20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 JADE1Q6IE81 842 aa20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 GLYCTKQ8IVS8 523 aa20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 C12orf76Q8N812 135 aaPredicted RBP20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 ZNF507Q8TCN5 953 aa20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 DDX27Q96GQ7 796 aaKnown RBP20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 TTPALQ9BTX7 342 aa20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 PCIF1Q9H4Z3 704 aa20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 TMEM206Q9H813 350 aa20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 SLC39A2Q9NP94 309 aa20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 USP25Q9UHP3 1055 aa20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 CDH22Q9UJ99 828 aa20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 C5orf42Q9H799 3197 aa20.3■□□□□ 0.84
PPP4R1-215ENST00000580182 VWA8A3KMH1 1905 aa20.29■□□□□ 0.84
PPP4R1-215ENST00000580182 GOLGA8IPA6NC78 632 aa20.29■□□□□ 0.84
PPP4R1-215ENST00000580182 GOLGA8JA6NMD2 632 aa20.29■□□□□ 0.84
PPP4R1-215ENST00000580182 NFICP08651 508 aa20.29■□□□□ 0.84
PPP4R1-215ENST00000580182 SRGAP2BP0DMP2 458 aa20.29■□□□□ 0.84
PPP4R1-215ENST00000580182 RPL9P32969 192 aaKnown RBP20.29■□□□□ 0.84
PPP4R1-215ENST00000580182 WNT7BP56706 349 aa20.29■□□□□ 0.84
PPP4R1-215ENST00000580182 SMAD2Q15796 467 aaKnown RBP20.29■□□□□ 0.84
PPP4R1-215ENST00000580182 STXBP4Q6ZWJ1 553 aa20.29■□□□□ 0.84
PPP4R1-215ENST00000580182 NELFCDQ8IXH7 590 aa20.29■□□□□ 0.84
PPP4R1-215ENST00000580182 LNX1Q8TBB1 728 aaPredicted RBP20.29■□□□□ 0.84
PPP4R1-215ENST00000580182 FAM213AQ9BRX8 229 aa20.29■□□□□ 0.84
PPP4R1-215ENST00000580182 UBQLN1Q9UMX0 589 aaKnown RBP20.29■□□□□ 0.84
PPP4R1-215ENST00000580182 USP15Q9Y4E8 981 aaPredicted RBP20.29■□□□□ 0.84
PPP4R1-215ENST00000580182 ANK1P16157 1881 aa20.28■□□□□ 0.84
PPP4R1-215ENST00000580182 EIF3DO15371 548 aaKnown RBP eCLIP20.28■□□□□ 0.84
PPP4R1-215ENST00000580182 ZNF202O95125 648 aa20.28■□□□□ 0.84
PPP4R1-215ENST00000580182 GARTP22102 1010 aa20.28■□□□□ 0.84
PPP4R1-215ENST00000580182 FGFR3P22607 806 aa20.28■□□□□ 0.84
PPP4R1-215ENST00000580182 TKTP29401 623 aaKnown RBP20.28■□□□□ 0.84
PPP4R1-215ENST00000580182 ELAVL2Q12926 359 aaKnown RBP20.28■□□□□ 0.84
PPP4R1-215ENST00000580182 KMT5BQ4FZB7 885 aa20.28■□□□□ 0.84
PPP4R1-215ENST00000580182 KRBA2Q6ZNG9 492 aa20.28■□□□□ 0.84
PPP4R1-215ENST00000580182 PPFIBP1Q86W92 1011 aa20.28■□□□□ 0.84
PPP4R1-215ENST00000580182 PALB2Q86YC2 1186 aa20.28■□□□□ 0.84
PPP4R1-215ENST00000580182 SCFD1Q8WVM8 642 aa20.28■□□□□ 0.84
PPP4R1-215ENST00000580182 CD320Q9NPF0 282 aa20.28■□□□□ 0.84
PPP4R1-215ENST00000580182 PLXNA3P51805 1871 aa20.28■□□□□ 0.84
PPP4R1-215ENST00000580182 TULP1O00294 542 aaPredicted RBP20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 PPEF2O14830 753 aa20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 ADH1AP07327 375 aa20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 SPATA31D3P0C874 917 aa20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 LRPAP1P30533 357 aa20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 STK4Q13043 487 aa20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 PSMD5Q16401 504 aa20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 ARMCX5Q6P1M9 558 aa20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 SPATA31D4Q6ZUB0 917 aa20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 CD302Q8IX05 232 aa20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 NOC3LQ8WTT2 800 aaKnown RBP20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 PIK3R5Q8WYR1 880 aa20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 FBXL18Q96ME1 805 aa20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 CLSTN3Q9BQT9 956 aa20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 FNIP2Q9P278 1114 aa20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 FAM50BQ9Y247 325 aa20.27■□□□□ 0.84
PPP4R1-215ENST00000580182 ADAM12O43184 909 aa20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 TGFB1I1O43294 461 aa20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 WEE2P0C1S8 567 aa20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 HOXB8P17481 243 aaPredicted RBP20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 CYP3A5P20815 502 aa20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 TMEM132DQ14C87 1099 aa20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 RARS2Q5T160 578 aaKnown RBP20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 SPATA1Q5VX52 437 aa20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 EFCAB13Q8IY85 973 aa20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 GPR65Q8IYL9 337 aa20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 SUSD6Q92537 303 aa20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 ASB7Q9H672 318 aa20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 EXOC1Q9NV70 894 aa20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 CIZ1Q9ULV3 898 aaPredicted RBP20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 NUB1Q9Y5A7 615 aa20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 MUC3AQ02505 3323 aa20.26■□□□□ 0.83
PPP4R1-215ENST00000580182 TGM5O43548 720 aa20.25■□□□□ 0.83
PPP4R1-215ENST00000580182 TRAPPC3O43617 180 aa20.25■□□□□ 0.83
PPP4R1-215ENST00000580182 RPN1P04843 607 aaKnown RBP20.25■□□□□ 0.83
PPP4R1-215ENST00000580182 MCM4P33991 863 aa20.25■□□□□ 0.83
PPP4R1-215ENST00000580182 RSPO2Q6UXX9 243 aaPredicted RBP20.25■□□□□ 0.83
PPP4R1-215ENST00000580182 BRSK2Q8IWQ3 736 aa20.25■□□□□ 0.83
PPP4R1-215ENST00000580182 KIAA0895Q8NCT3 520 aa20.25■□□□□ 0.83
PPP4R1-215ENST00000580182 BEST2Q8NFU1 509 aa20.25■□□□□ 0.83
PPP4R1-215ENST00000580182 FAM84AQ96KN4 292 aa20.25■□□□□ 0.83
PPP4R1-215ENST00000580182 MAN1C1Q9NR34 630 aa20.25■□□□□ 0.83
PPP4R1-215ENST00000580182 DZANK1Q9NVP4 752 aa20.25■□□□□ 0.83
PPP4R1-215ENST00000580182 GOLGA6L4A6NEF3 574 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 TNFRSF10AO00220 468 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 CLIC2O15247 247 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 XPOTO43592 962 aaKnown RBP20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 EXTL3O43909 919 aa20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 LDHAP00338 332 aaKnown RBP20.24■□□□□ 0.83
PPP4R1-215ENST00000580182 GLUD1P00367 558 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms