RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 TLCD1Q96CP7 247 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 SEC16BQ96JE7 1060 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 CABS1Q96KC9 395 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 IFT74Q96LB3 600 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 FBXL18Q96ME1 805 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 PRMT1Q99873 361 aaKnown RBP11.19□□□□□ -0.62
TOP3A-209ENST00000580095 ADAM33Q9BZ11 813 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 PICK1Q9NRD5 415 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 TBK1Q9UHD2 729 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 MYPNQ86TC9 1320 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 HGSO14964 777 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-209ENST00000580095 PPP1R12AO14974 1030 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-209ENST00000580095 RIPK2O43353 540 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 PSAPP07602 524 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 TAS2R40P59535 323 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 ADCY2Q08462 1091 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 TNFAIP1Q13829 316 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 EMC2Q15006 297 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 KYNUQ16719 465 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 ANGEL2Q5VTE6 544 aaKnown RBP11.19□□□□□ -0.62
TOP3A-209ENST00000580095 TAX1BP1Q86VP1 789 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 CDR2LQ86X02 465 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-209ENST00000580095 ZBTB10Q96DT7 871 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 XPO6Q96QU8 1125 aaKnown RBP11.19□□□□□ -0.62
TOP3A-209ENST00000580095 JPH2Q9BR39 696 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-209ENST00000580095 R3HDMLQ9H3Y0 253 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 ATP6V0A4Q9HBG4 840 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 AAASQ9NRG9 546 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 CYP39A1Q9NYL5 469 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 PIM2Q9P1W9 311 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 MTRF1LQ9UGC7 380 aaKnown RBP11.19□□□□□ -0.62
TOP3A-209ENST00000580095 AGO2Q9UKV8 859 aaKnown RBP11.19□□□□□ -0.62
TOP3A-209ENST00000580095 PCDHB4Q9Y5E5 795 aa11.19□□□□□ -0.62
TOP3A-209ENST00000580095 A6NNZ2 444 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 NSFP46459 744 aaKnown RBP11.18□□□□□ -0.62
TOP3A-209ENST00000580095 INHBEP58166 350 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 CALCOCO2Q13137 446 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 BYSLQ13895 437 aaKnown RBP11.18□□□□□ -0.62
TOP3A-209ENST00000580095 TUBB8Q3ZCM7 444 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 KCNV1Q6PIU1 500 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 HOOK3Q86VS8 718 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 TMC2Q8TDI7 906 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 NTPCRQ9BSD7 190 aaKnown RBP11.18□□□□□ -0.62
TOP3A-209ENST00000580095 OSBPL7Q9BZF2 842 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 CDC42EP4Q9H3Q1 356 aaKnown RBP11.18□□□□□ -0.62
TOP3A-209ENST00000580095 UVRAGQ9P2Y5 699 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 PASKQ96RG2 1323 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 DNM1LO00429 736 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 PODXLO00592 558 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 RASGRF2O14827 1237 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 DGAT1O75907 488 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 UNGP13051 313 aaPredicted RBP11.18□□□□□ -0.62
TOP3A-209ENST00000580095 KRT10P13645 584 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 MARK3P27448 753 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 MTM1Q13496 603 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 C11orf91Q3C1V1 193 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 BRDTQ58F21 947 aaPredicted RBP11.18□□□□□ -0.62
TOP3A-209ENST00000580095 WDR44Q5JSH3 913 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 SWT1Q5T5J6 900 aaKnown RBP11.18□□□□□ -0.62
TOP3A-209ENST00000580095 CRELD2Q6UXH1 353 aaPredicted RBP11.18□□□□□ -0.62
TOP3A-209ENST00000580095 ABHD15Q6UXT9 468 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 SPIRE2Q8WWL2 714 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 HAUS1Q96CS2 278 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 RBAKQ9NYW8 714 aaPredicted RBP11.18□□□□□ -0.62
TOP3A-209ENST00000580095 ARHGAP28Q9P2N2 729 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 NUB1Q9Y5A7 615 aa11.18□□□□□ -0.62
TOP3A-209ENST00000580095 MAPK13O15264 365 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 MTA2O94776 668 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 NUDT17P0C025 328 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 GLRA2P23416 452 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 ADCY8P40145 1251 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 TNFSF9P41273 254 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 ITGA8P53708 1063 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 EIF3BP55884 814 aaKnown RBP11.17□□□□□ -0.62
TOP3A-209ENST00000580095 RPL7AP62424 266 aaKnown RBP11.17□□□□□ -0.62
TOP3A-209ENST00000580095 GHRHRQ02643 423 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 PPP2R5EQ16537 467 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 CAPN12Q6ZSI9 719 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 TAB3Q8N5C8 712 aaPredicted RBP11.17□□□□□ -0.62
TOP3A-209ENST00000580095 SAMD3Q8N6K7 520 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 REPS2Q8NFH8 660 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 ART4Q93070 314 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 GPRASP2Q96D09 838 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 CEP89Q96ST8 783 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 PDLIM7Q9NR12 457 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 CD2APQ9Y5K6 639 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 GOLGA6L7A0A1B0GV03 622 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 K7ERI5 159 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 VIMP08670 466 aaKnown RBP11.17□□□□□ -0.62
TOP3A-209ENST00000580095 DRD4P21917 467 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 HNRNPH1P31943 449 aaKnown RBP11.17□□□□□ -0.62
TOP3A-209ENST00000580095 FNTAP49354 379 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 DRG2P55039 364 aaKnown RBP11.17□□□□□ -0.62
TOP3A-209ENST00000580095 OSTNP61366 133 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 STRN3Q13033 797 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 AUHQ13825 339 aaKnown RBP11.17□□□□□ -0.62
TOP3A-209ENST00000580095 DALRD3Q5D0E6 543 aaKnown RBP11.17□□□□□ -0.62
TOP3A-209ENST00000580095 CCDC121Q6ZUS5 278 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 CCDC13Q8IYE1 715 aa11.17□□□□□ -0.62
TOP3A-209ENST00000580095 LRRC34Q8IZ02 419 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms