RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 GOLGA8CPA6NN73 597 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 DDX39AO00148 427 aaKnown RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 PLK4O00444 970 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ARHGAP33O14559 1287 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 TRDMT1O14717 391 aaKnown RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 MEIS2O14770 477 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 FOXP2O15409 715 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 TLX3O43711 291 aaPredicted RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 CBFA2T3O75081 653 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 MOSPD3O75425 235 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 CCNE2O96020 404 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 EGFP01133 1207 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 LRG1P02750 347 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 SYPP08247 313 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 SERPINF2P08697 491 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ATXN1LP0C7T5 689 aaKnown RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 MYF5P13349 255 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ITGA4P13612 1032 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 HLA-EP13747 358 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 GJA1P17302 382 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 CR2P20023 1033 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 POU3F2P20265 443 aaPredicted RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 SFPQP23246 707 aaKnown RBP eCLIP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ITPKAP23677 461 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ELF1P32519 619 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 CCR2P41597 374 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 DPP6P42658 865 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 PTGER3P43115 390 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 GALK1P51570 392 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 HAND2P61296 217 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 TNK2Q07912 1038 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 DSC1Q08554 894 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 SPIRE1Q08AE8 756 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 FCHO2Q0JRZ9 810 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 KCNH2Q12809 1159 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ITGB3BPQ13352 177 aaPredicted RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 HDAC1Q13547 482 aaPredicted RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 DMC1Q14565 340 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 GSE1Q14687 1217 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 PTPAQ15257 358 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 PKDCCQ504Y2 493 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ARHGAP29Q52LW3 1261 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 C2orf27AQ580R0 203 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 TMEM196Q5HYL7 178 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 PRSS36Q5K4E3 855 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 SPDYCQ5MJ68 293 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 RTP2Q5QGT7 225 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 TMCO4Q5TGY1 634 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 VPS53Q5VIR6 699 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ZKSCAN2Q63HK3 967 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 FSTL4Q6MZW2 842 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ZNF746Q6NUN9 644 aaPredicted RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 MIS18BP1Q6P0N0 1132 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 PDZD4Q76G19 769 aaPredicted RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ARMCX6Q7L4S7 300 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 LPCAT2Q7L5N7 544 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 SYT13Q7L8C5 426 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 CATSPER4Q7RTX7 472 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 HAUS6Q7Z4H7 955 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 GLRX5Q86SX6 157 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ARID3BQ8IVW6 561 aaPredicted RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 CCDC60Q8IWA6 550 aaPredicted RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ITPRIPQ8IWB1 547 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 HS6ST3Q8IZP7 471 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 CMTR1Q8N1G2 835 aaKnown RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 LINC01465Q8N7H1 131 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 DAGLBQ8NCG7 672 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 OR2I1PQ8NGU4 316 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 CEP76Q8TAP6 659 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 WHAMMQ8TF30 809 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 SETD7Q8WTS6 366 aaKnown RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 BAP1Q92560 729 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 RABGGTAQ92696 567 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ESR2Q92731 530 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 FGF11Q92914 225 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 RSPRY1Q96DX4 576 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 MED8Q96G25 268 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 LIN37Q96GY3 246 aaPredicted RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ZFYVE19Q96K21 471 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ZNF512Q96ME7 567 aaPredicted RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 LRRC3BQ96PB8 259 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 PNMA5Q96PV4 448 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 ZSCAN10Q96SZ4 725 aaPredicted RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 MXRA8Q9BRK3 442 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 FDXACB1Q9BRP7 624 aaPredicted RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 TPSD1Q9BZJ3 242 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 FAM117AQ9C073 453 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 GPR88Q9GZN0 384 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 RNF39Q9H2S5 420 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 RIOX1Q9H6W3 641 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 CAPN10Q9HC96 672 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 FBRSL1Q9HCM7 1045 aaKnown RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 NRBP2Q9NSY0 501 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 DNAAF2Q9NVR5 837 aaKnown RBP2.71□□□□□ -1.98
SNORD53-201ENST00000579969 SEPT3Q9UH03 358 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 MAD2L2Q9UI95 211 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 PILRBQ9UKJ0 227 aa2.71□□□□□ -1.98
SNORD53-201ENST00000579969 CEP131Q9UPN4 1083 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms