RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 SMIM28A0A1B0GU29 152 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 WDR27A2RRH5 827 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 SHISA7A6NL88 538 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 H7C4K7 107 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 K7ERI5 159 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 SYN3O14994 580 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 JAK2O60674 1132 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 LARGE1O95461 756 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 OR52Z1P0C646 297 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 ATF2P15336 505 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 FCARP24071 287 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 GRM5P41594 1212 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 FOSBP53539 338 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 ATXN1P54253 815 aaKnown RBP9.39□□□□□ -0.91
CASC3-206ENST00000579238 YARSP54577 528 aaKnown RBP9.39□□□□□ -0.91
CASC3-206ENST00000579238 LMNB2Q03252 620 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 MTAPQ13126 283 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 SAFBQ15424 915 aaKnown RBP eCLIP9.39□□□□□ -0.91
CASC3-206ENST00000579238 PRSS36Q5K4E3 855 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 HAUS3Q68CZ6 603 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 TSSK4Q6SA08 328 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 ALKAL1Q6UXT8 129 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 MAMSTRQ6ZN01 415 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 TCEAL8Q8IYN2 117 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 ZNF687Q8N1G0 1237 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 CORO1BQ9BR76 489 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 IER2Q9BTL4 223 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 TRMT61BQ9BVS5 477 aaKnown RBP9.39□□□□□ -0.91
CASC3-206ENST00000579238 CCDC94Q9BW85 323 aaPredicted RBP9.39□□□□□ -0.91
CASC3-206ENST00000579238 CDT1Q9H211 546 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 CHRDQ9H2X0 955 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 BRD9Q9H8M2 597 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 TRPV5Q9NQA5 729 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 TOPORSQ9NS56 1045 aaPredicted RBP9.39□□□□□ -0.91
CASC3-206ENST00000579238 SLC38A7Q9NVC3 462 aa9.39□□□□□ -0.91
CASC3-206ENST00000579238 CDV3Q9UKY7 258 aaKnown RBP9.39□□□□□ -0.91
CASC3-206ENST00000579238 PHLPP2Q6ZVD8 1323 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 PODXLO00592 558 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 KCNE1P15382 129 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 TGM1P22735 817 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 RPL9P32969 192 aaKnown RBP9.38□□□□□ -0.91
CASC3-206ENST00000579238 NRLP54845 237 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 SOX4Q06945 474 aaPredicted RBP9.38□□□□□ -0.91
CASC3-206ENST00000579238 MRPL58Q14197 206 aaKnown RBP9.38□□□□□ -0.91
CASC3-206ENST00000579238 GRM2Q14416 872 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 PPP2R5DQ14738 602 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 ZNF174Q15697 407 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 ZNF568Q3ZCX4 644 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 FAM78AQ5JUQ0 283 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 TPGS2Q68CL5 300 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 PDZD4Q76G19 769 aaPredicted RBP9.38□□□□□ -0.91
CASC3-206ENST00000579238 ELMOD1Q8N336 334 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 CEP120Q8N960 986 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 IRF7Q92985 503 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 TCEAL4Q96EI5 215 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 ZMAT2Q96NC0 199 aaKnown RBP9.38□□□□□ -0.91
CASC3-206ENST00000579238 ASB16Q96NS5 453 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 ACO2Q99798 780 aaKnown RBP9.38□□□□□ -0.91
CASC3-206ENST00000579238 BHMT2Q9H2M3 363 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 TMEM134Q9H6X4 195 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 CYP4F11Q9HBI6 524 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 POLD4Q9HCU8 107 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 ZNF334Q9HCZ1 680 aaPredicted RBP9.38□□□□□ -0.91
CASC3-206ENST00000579238 PTPRHQ9HD43 1115 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 GMEB2Q9UKD1 530 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 MAFFQ9ULX9 164 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 USP18Q9UMW8 372 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 NDRG2Q9UN36 371 aaKnown RBP9.38□□□□□ -0.91
CASC3-206ENST00000579238 INSL5Q9Y5Q6 135 aa9.38□□□□□ -0.91
CASC3-206ENST00000579238 F5P12259 2224 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 NCOR2Q9Y618 2525 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 CCDC169A6NNP5 214 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 SEC24AO95486 1093 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 TDGF1P13385 188 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 PSMC3P17980 439 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 CCT6AP40227 531 aaKnown RBP9.37□□□□□ -0.91
CASC3-206ENST00000579238 CCR2P41597 374 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 NPTX2P47972 431 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 CCR3P51677 355 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 ARPP19P56211 112 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 PEX3P56589 373 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 OSTNP61366 133 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 GUCY1B3Q02153 619 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 ECM1Q16610 540 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 CTXN3Q4LDR2 81 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 CYP4A22Q5TCH4 519 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 IQCEQ6IPM2 695 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 VITQ6UXI7 678 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 MAP4K3Q8IVH8 894 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 CELF5Q8N6W0 485 aaKnown RBP9.37□□□□□ -0.91
CASC3-206ENST00000579238 LEMD2Q8NC56 503 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 DEPDC1BQ8WUY9 529 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 FAM3CQ92520 227 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 SMARCD2Q92925 531 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 SUSD3Q96L08 255 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 CNTNAP3BQ96NU0 1288 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 ACAP3Q96P50 834 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 RTKNQ9BST9 563 aa9.37□□□□□ -0.91
CASC3-206ENST00000579238 MRPL4Q9BYD3 311 aaKnown RBP9.37□□□□□ -0.91
CASC3-206ENST00000579238 CNTNAP3Q9BZ76 1288 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms