RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 TARSP26639 723 aaKnown RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 HOXC13P31276 330 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 CCR2P41597 374 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 NAMPTP43490 491 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 TOB1P50616 345 aaPredicted RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 ANAPC15P60006 121 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 CREMQ03060 361 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 CSTF1Q05048 431 aaKnown RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 PTGDRQ13258 359 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 FZD5Q13467 585 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 RAB33AQ14088 237 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 GRM2Q14416 872 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 PCBP1Q15365 356 aaKnown RBP eCLIP4.22□□□□□ -1.73
NUP85-209ENST00000578987 SAFBQ15424 915 aaKnown RBP eCLIP4.22□□□□□ -1.73
NUP85-209ENST00000578987 ZRSR1Q15695 479 aaKnown RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 IL17AQ16552 155 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 UPP1Q16831 310 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 C8orf34Q49A92 452 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 PABPC1LQ4VXU2 614 aaKnown RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 TTC38Q5R3I4 469 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 ZBTB41Q5SVQ8 909 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 LIN9Q5TKA1 542 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 ATF7IP2Q5U623 682 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 CDCA2Q69YH5 1023 aaPredicted RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 PHLDB3Q6NSJ2 640 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 ELMSAN1Q6PJG2 1045 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 ALKAL1Q6UXT8 129 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 TAS1R3Q7RTX0 852 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 KCNK18Q7Z418 384 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 DAW1Q8N136 415 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 SUMF1Q8NBK3 374 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 MCPH1Q8NEM0 835 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 C18orf25Q96B23 403 aaPredicted RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 POM121Q96HA1 1249 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 C8orf76Q96K31 380 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 IFT74Q96LB3 600 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 PRIMPOLQ96LW4 560 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 ZSWIM3Q96MP5 696 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 ZMAT2Q96NC0 199 aaKnown RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 PPP1R10Q96QC0 940 aaKnown RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 ACO2Q99798 780 aaKnown RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 CORO1BQ9BR76 489 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 TCHPQ9BT92 498 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 TARS2Q9BW92 718 aaKnown RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 BACH2Q9BYV9 841 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 RHOBTB2Q9BYZ6 727 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 C2orf40Q9H1Z8 148 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 CDT1Q9H211 546 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 CYP4F11Q9HBI6 524 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 KMT5AQ9NQR1 393 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 SLC2A4RGQ9NR83 387 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 HEBP1Q9NRV9 189 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 IGSF5Q9NSI5 407 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 SPATA6Q9NWH7 488 aaPredicted RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 LRWD1Q9UFC0 647 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 NDRG2Q9UN36 371 aaKnown RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 LIMCH1Q9UPQ0 1083 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 MRPS23Q9Y3D9 190 aaKnown RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 TIMM13Q9Y5L4 95 aaPredicted RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 GREB1Q4ZG55 1949 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 DCHS1Q96JQ0 3298 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 NUP210Q8TEM1 1887 aaPredicted RBP4.22□□□□□ -1.73
NUP85-209ENST00000578987 THADAQ6YHU6 1953 aa4.22□□□□□ -1.73
NUP85-209ENST00000578987 CACNA1HO95180 2353 aa4.21□□□□□ -1.73
NUP85-209ENST00000578987 RIF1Q5UIP0 2472 aaKnown RBP4.21□□□□□ -1.73
NUP85-209ENST00000578987 SPAG17Q6Q759 2223 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 SHISA7A6NL88 538 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 PODXLO00592 558 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 LAMTOR5O43504 91 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 HIP1RO75146 1068 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 XYLBO75191 536 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 ABLIM3O94929 683 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 C1RP00736 705 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 LRG1P02750 347 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 OR4Q2P0C623 313 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 MYL4P12829 197 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 ELF1P32519 619 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 VIPR2P41587 438 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 GRM5P41594 1212 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 MATR3P43243 847 aaKnown RBP eCLIP4.21□□□□□ -1.74
NUP85-209ENST00000578987 NPTX2P47972 431 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 YARSP54577 528 aaKnown RBP4.21□□□□□ -1.74
NUP85-209ENST00000578987 ROR1Q01973 937 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 ADCY1Q08828 1119 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 ELAVL2Q12926 359 aaKnown RBP4.21□□□□□ -1.74
NUP85-209ENST00000578987 GNL2Q13823 731 aaKnown RBP4.21□□□□□ -1.74
NUP85-209ENST00000578987 DHX8Q14562 1220 aaKnown RBP4.21□□□□□ -1.74
NUP85-209ENST00000578987 PPP2R5AQ15172 486 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 MLF2Q15773 248 aaPredicted RBP4.21□□□□□ -1.74
NUP85-209ENST00000578987 LPAL2Q16609 132 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 RSPO4Q2I0M5 234 aaPredicted RBP4.21□□□□□ -1.74
NUP85-209ENST00000578987 UVSSAQ2YD98 709 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 SLC10A6Q3KNW5 377 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 ZNF568Q3ZCX4 644 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 FAM78AQ5JUQ0 283 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 VARS2Q5ST30 1063 aaKnown RBP4.21□□□□□ -1.74
NUP85-209ENST00000578987 RINT1Q6NUQ1 792 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.21□□□□□ -1.74
NUP85-209ENST00000578987 RNF19BQ6ZMZ0 732 aa4.21□□□□□ -1.74
NUP85-209ENST00000578987 TPRG1Q6ZUI0 275 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms