RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 VWA3AA6NCI4 1184 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 EIF5BO60841 1220 aaKnown RBP9.78□□□□□ -0.84
GGA3-207ENST00000578896 SEC24AO95486 1093 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 CEBPBP17676 345 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 PROZP22891 400 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 GUCY2FP51841 1108 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 CDR1P51861 262 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 ROR1Q01973 937 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 DHX8Q14562 1220 aaKnown RBP9.78□□□□□ -0.84
GGA3-207ENST00000578896 SLC10A6Q3KNW5 377 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 PABPC1LQ4VXU2 614 aaKnown RBP9.78□□□□□ -0.84
GGA3-207ENST00000578896 XKR4Q5GH76 650 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 MPZL3Q6UWV2 235 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 NPAS3Q8IXF0 933 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 KCNG4Q8TDN1 519 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 LRRC15Q8TF66 581 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 NXPE3Q969Y0 559 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 TCEAL4Q96EI5 215 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 RAB34Q9BZG1 259 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 HAPLN2Q9GZV7 340 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 SLC2A4RGQ9NR83 387 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 DLGAP2Q9P1A6 1054 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 TUBGCP4Q9UGJ1 667 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 MRPS23Q9Y3D9 190 aaKnown RBP9.78□□□□□ -0.84
GGA3-207ENST00000578896 SIT1Q9Y3P8 196 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 TIMM13Q9Y5L4 95 aaPredicted RBP9.78□□□□□ -0.84
GGA3-207ENST00000578896 BACE2Q9Y5Z0 518 aa9.78□□□□□ -0.84
GGA3-207ENST00000578896 DMXL1Q9Y485 3027 aa9.77□□□□□ -0.84
GGA3-207ENST00000578896 PRRG1O14668 218 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 TRAPPC3O43617 180 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 RHOP08100 348 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 PLA2G4BP0C869 781 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 CXCL8P10145 99 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 MCF2P10911 925 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 KCNE1P15382 129 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 GJA1P17302 382 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 GJB2P29033 226 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 HOXA9P31269 272 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 ELF1P32519 619 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 PRPHP41219 470 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 MATR3P43243 847 aaKnown RBP eCLIP9.77□□□□□ -0.85
GGA3-207ENST00000578896 SLC12A3P55017 1021 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 ATP2C1P98194 919 aaPredicted RBP9.77□□□□□ -0.85
GGA3-207ENST00000578896 UVSSAQ2YD98 709 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 SLC44A4Q53GD3 710 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 ARSHQ5FYA8 562 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 ZBTB41Q5SVQ8 909 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 TANGO2Q6ICL3 276 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 PDXDC1Q6P996 788 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 ANKS3Q6ZW76 656 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 APBB1IPQ7Z5R6 666 aaPredicted RBP9.77□□□□□ -0.85
GGA3-207ENST00000578896 GPIHBP1Q8IV16 184 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 HS6ST3Q8IZP7 471 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 TMEM161BQ8NDZ6 487 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 TMX3Q96JJ7 454 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 DRC1Q96MC2 740 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 UROC1Q96N76 676 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 CORO1BQ9BR76 489 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 CYP4F11Q9HBI6 524 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 TOPORSQ9NS56 1045 aaPredicted RBP9.77□□□□□ -0.85
GGA3-207ENST00000578896 FBXL5Q9UKA1 691 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 NUB1Q9Y5A7 615 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 FANCMQ8IYD8 2048 aa9.77□□□□□ -0.85
GGA3-207ENST00000578896 ATG2BQ96BY7 2078 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 H3BQV1 296 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 TBC1D4O60343 1298 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 ABLIM3O94929 683 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 LRG1P02750 347 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 OR4Q2P0C623 313 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 MAPTP10636 758 aaKnown RBP9.76□□□□□ -0.85
GGA3-207ENST00000578896 PLS3P13797 630 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 GUCY2CP25092 1073 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 MCM4P33991 863 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 TNFSF9P41273 254 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 CCR2P41597 374 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 GRIN1Q05586 938 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 STRN3Q13033 797 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 MRPL58Q14197 206 aaKnown RBP9.76□□□□□ -0.85
GGA3-207ENST00000578896 GRM2Q14416 872 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 NOLC1Q14978 699 aaKnown RBP eCLIP9.76□□□□□ -0.85
GGA3-207ENST00000578896 UBXN2BQ14CS0 331 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 MLF2Q15773 248 aaPredicted RBP9.76□□□□□ -0.85
GGA3-207ENST00000578896 CTXN3Q4LDR2 81 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 SLC8B1Q6J4K2 584 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 PHLDB3Q6NSJ2 640 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 SYT2Q8N9I0 419 aaPredicted RBP9.76□□□□□ -0.85
GGA3-207ENST00000578896 PJA1Q8NG27 643 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 ZNF461Q8TAF7 563 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 DDX12PQ92771 950 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 CDK5RAP3Q96JB5 506 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 TBC1D32Q96NH3 1257 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 SLC38A7Q9NVC3 462 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 CNTN3Q9P232 1028 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 RBM19Q9Y4C8 960 aaKnown RBP9.76□□□□□ -0.85
GGA3-207ENST00000578896 STK24Q9Y6E0 443 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 ZFP37Q9Y6Q3 630 aaPredicted RBP9.76□□□□□ -0.85
GGA3-207ENST00000578896 SCN1AP35498 2009 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 DNAH14Q0VDD8 3507 aa9.76□□□□□ -0.85
GGA3-207ENST00000578896 NCOR2Q9Y618 2525 aa9.75□□□□□ -0.85
GGA3-207ENST00000578896 ARHGEF37A1IGU5 675 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms