RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 SCP2P22307 547 aa17.33■□□□□ 0.36
CRLF3-203ENST00000578692 FSHRP23945 695 aa17.33■□□□□ 0.36
CRLF3-203ENST00000578692 LIG4P49917 911 aa17.33■□□□□ 0.36
CRLF3-203ENST00000578692 ZNF131P52739 623 aa17.33■□□□□ 0.36
CRLF3-203ENST00000578692 RTL10Q7L3V2 364 aa17.33■□□□□ 0.36
CRLF3-203ENST00000578692 SLC44A3Q8N4M1 653 aa17.33■□□□□ 0.36
CRLF3-203ENST00000578692 SLC7A14Q8TBB6 771 aa17.33■□□□□ 0.36
CRLF3-203ENST00000578692 LARP4BQ92615 738 aaKnown RBP17.33■□□□□ 0.36
CRLF3-203ENST00000578692 BACH2Q9BYV9 841 aa17.33■□□□□ 0.36
CRLF3-203ENST00000578692 ZHX3Q9H4I2 956 aa17.33■□□□□ 0.36
CRLF3-203ENST00000578692 PLEKHA5Q9HAU0 1116 aa17.33■□□□□ 0.36
CRLF3-203ENST00000578692 ZFP37Q9Y6Q3 630 aaPredicted RBP17.33■□□□□ 0.36
CRLF3-203ENST00000578692 K7ENM7 598 aa17.32■□□□□ 0.36
CRLF3-203ENST00000578692 SYN3O14994 580 aa17.32■□□□□ 0.36
CRLF3-203ENST00000578692 NARSO43776 548 aaKnown RBP17.32■□□□□ 0.36
CRLF3-203ENST00000578692 CXCL8P10145 99 aa17.32■□□□□ 0.36
CRLF3-203ENST00000578692 MARCKSP29966 332 aaPredicted RBP17.32■□□□□ 0.36
CRLF3-203ENST00000578692 MRE11P49959 708 aa17.32■□□□□ 0.36
CRLF3-203ENST00000578692 CLCN5P51795 746 aa17.32■□□□□ 0.36
CRLF3-203ENST00000578692 NTHL1P78549 312 aa17.32■□□□□ 0.36
CRLF3-203ENST00000578692 PTPAQ15257 358 aa17.32■□□□□ 0.36
CRLF3-203ENST00000578692 SPECC1Q5M775 1068 aa17.32■□□□□ 0.36
CRLF3-203ENST00000578692 VARS2Q5ST30 1063 aaKnown RBP17.32■□□□□ 0.36
CRLF3-203ENST00000578692 ASTLQ6HA08 431 aaPredicted RBP17.32■□□□□ 0.36
CRLF3-203ENST00000578692 SLC8B1Q6J4K2 584 aa17.32■□□□□ 0.36
CRLF3-203ENST00000578692 ZNF461Q8TAF7 563 aa17.32■□□□□ 0.36
CRLF3-203ENST00000578692 EPSTI1Q96J88 318 aa17.32■□□□□ 0.36
CRLF3-203ENST00000578692 FBXL21Q9UKT6 434 aa17.32■□□□□ 0.36
CRLF3-203ENST00000578692 TTC26A0AVF1 554 aa17.31■□□□□ 0.36
CRLF3-203ENST00000578692 H7C4K7 107 aa17.31■□□□□ 0.36
CRLF3-203ENST00000578692 HNRNPDLO14979 420 aaKnown RBP17.31■□□□□ 0.36
CRLF3-203ENST00000578692 PIGRP01833 764 aa17.31■□□□□ 0.36
CRLF3-203ENST00000578692 TNFSF9P41273 254 aa17.31■□□□□ 0.36
CRLF3-203ENST00000578692 SPAG1Q07617 926 aa17.31■□□□□ 0.36
CRLF3-203ENST00000578692 MRPL58Q14197 206 aaKnown RBP17.31■□□□□ 0.36
CRLF3-203ENST00000578692 KYAT1Q16773 422 aa17.31■□□□□ 0.36
CRLF3-203ENST00000578692 FAM173BQ6P4H8 233 aa17.31■□□□□ 0.36
CRLF3-203ENST00000578692 USP49Q70CQ1 688 aa17.31■□□□□ 0.36
CRLF3-203ENST00000578692 TMEM105Q8N8V8 129 aa17.31■□□□□ 0.36
CRLF3-203ENST00000578692 INTS4Q96HW7 963 aaKnown RBP17.31■□□□□ 0.36
CRLF3-203ENST00000578692 SUSD3Q96L08 255 aa17.31■□□□□ 0.36
CRLF3-203ENST00000578692 IRF2BPLQ9H1B7 796 aa17.31■□□□□ 0.36
CRLF3-203ENST00000578692 WNT16Q9UBV4 365 aa17.31■□□□□ 0.36
CRLF3-203ENST00000578692 CCDC39Q9UFE4 941 aa17.31■□□□□ 0.36
CRLF3-203ENST00000578692 SRPRBQ9Y5M8 271 aaKnown RBP17.31■□□□□ 0.36
CRLF3-203ENST00000578692 DOCK6Q96HP0 2047 aa17.31■□□□□ 0.36
CRLF3-203ENST00000578692 DOCK8Q8NF50 2099 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 ANHXE9PGG2 379 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 OGTO15294 1046 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 TBC1D4O60343 1298 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 TBCAO75347 108 aaKnown RBP17.3■□□□□ 0.36
CRLF3-203ENST00000578692 ABLIM3O94929 683 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 CFHP08603 1231 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 POU2F2P09086 479 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 ELF1P32519 619 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 ABCD1P33897 745 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 MCM4P33991 863 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 ARPP19P56211 112 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 GTF2BQ00403 316 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 ROR1Q01973 937 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 RESTQ13127 1097 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 ZBTB6Q15916 424 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 KRI1Q8N9T8 703 aaKnown RBP17.3■□□□□ 0.36
CRLF3-203ENST00000578692 FLCNQ8NFG4 579 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 KIF12Q96FN5 646 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 FIZ1Q96SL8 496 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 DNMT3BQ9UBC3 853 aaKnown RBP17.3■□□□□ 0.36
CRLF3-203ENST00000578692 TUBGCP4Q9UGJ1 667 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 FBXO2Q9UK22 296 aaPredicted RBP17.3■□□□□ 0.36
CRLF3-203ENST00000578692 CDH7Q9ULB5 785 aa17.3■□□□□ 0.36
CRLF3-203ENST00000578692 PDCD11Q14690 1871 aaKnown RBP17.3■□□□□ 0.36
CRLF3-203ENST00000578692 WDR27A2RRH5 827 aa17.29■□□□□ 0.36
CRLF3-203ENST00000578692 LACTBL1A8MY62 500 aa17.29■□□□□ 0.36
CRLF3-203ENST00000578692 GALR2O43603 387 aaPredicted RBP17.29■□□□□ 0.36
CRLF3-203ENST00000578692 SRFP11831 508 aa17.29■□□□□ 0.36
CRLF3-203ENST00000578692 NPR3P17342 541 aa17.29■□□□□ 0.36
CRLF3-203ENST00000578692 NMT1P30419 496 aaKnown RBP17.29■□□□□ 0.36
CRLF3-203ENST00000578692 CEBPZQ03701 1054 aaKnown RBP17.29■□□□□ 0.36
CRLF3-203ENST00000578692 PPP2R3AQ06190 1150 aa17.29■□□□□ 0.36
CRLF3-203ENST00000578692 SIX5Q8N196 739 aa17.29■□□□□ 0.36
CRLF3-203ENST00000578692 APPL2Q8NEU8 664 aa17.29■□□□□ 0.36
CRLF3-203ENST00000578692 DDX12PQ92771 950 aa17.29■□□□□ 0.36
CRLF3-203ENST00000578692 CLIC6Q96NY7 704 aa17.29■□□□□ 0.36
CRLF3-203ENST00000578692 PHOX2BQ99453 314 aa17.29■□□□□ 0.36
CRLF3-203ENST00000578692 RPF1Q9H9Y2 349 aaKnown RBP17.29■□□□□ 0.36
CRLF3-203ENST00000578692 HCFC1R1Q9NWW0 138 aa17.29■□□□□ 0.36
CRLF3-203ENST00000578692 UBQLN1Q9UMX0 589 aaKnown RBP17.29■□□□□ 0.36
CRLF3-203ENST00000578692 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.29■□□□□ 0.36
CRLF3-203ENST00000578692 A0A0B4J269 797 aa17.28■□□□□ 0.36
CRLF3-203ENST00000578692 H0Y858 1186 aa17.28■□□□□ 0.36
CRLF3-203ENST00000578692 XPOTO43592 962 aaKnown RBP17.28■□□□□ 0.36
CRLF3-203ENST00000578692 ATF2P15336 505 aa17.28■□□□□ 0.36
CRLF3-203ENST00000578692 CYP3A5P20815 502 aa17.28■□□□□ 0.36
CRLF3-203ENST00000578692 LRPAP1P30533 357 aa17.28■□□□□ 0.36
CRLF3-203ENST00000578692 HTR4Q13639 388 aa17.28■□□□□ 0.36
CRLF3-203ENST00000578692 CTXN3Q4LDR2 81 aa17.28■□□□□ 0.36
CRLF3-203ENST00000578692 PABPC1LQ4VXU2 614 aaKnown RBP17.28■□□□□ 0.36
CRLF3-203ENST00000578692 ZBTB41Q5SVQ8 909 aa17.28■□□□□ 0.36
CRLF3-203ENST00000578692 CWF19L1Q69YN2 538 aaKnown RBP17.28■□□□□ 0.36
CRLF3-203ENST00000578692 DYMQ7RTS9 669 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms