RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 ABRAQ8N0Z2 381 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 UBR7Q8N806 425 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 RBBP8NLQ8NC74 664 aaPredicted RBP9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 BCAS4Q8TDM0 211 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SEPT1Q8WYJ6 367 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SLCO2A1Q92959 643 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MPHOSPH6Q99547 160 aaKnown RBP9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SPATC1LQ9H0A9 340 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 LRRC19Q9H756 370 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 APOBEC3GQ9HC16 384 aaKnown RBP9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CNTN6Q9UQ52 1028 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ATP8A1Q9Y2Q0 1164 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CSADQ9Y600 493 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PTPRJQ12913 1337 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MROH7Q68CQ1 1323 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CNTNAP2Q9UHC6 1331 aa9.98□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TCRBV7S2A1N4TA0A589 114 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MYO1CO00159 1063 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 IRF6O14896 467 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 GAS2O43903 313 aaKnown RBP9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 LGR5O75473 907 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CNMDO75829 334 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PROSCO94903 275 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ECEL1O95672 775 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 EDN1P05305 212 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TGFB3P10600 412 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 RRM1P23921 792 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 LSP1P33241 339 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MAN1A1P33908 653 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CCT5P48643 541 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 EFNA5P52803 228 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PLTPP55058 493 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PPP2R2AP63151 447 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 NOMO3P69849 1222 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 NOP14P78316 857 aaKnown RBP9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 IRX3P78415 501 aaPredicted RBP9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 IFFO1Q0D2I5 559 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SURF1Q15526 300 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PTGISQ16647 500 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ZBTB41Q5SVQ8 909 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TTC19Q6DKK2 380 aaPredicted RBP9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 METTL7BQ6UX53 244 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SYDE1Q6ZW31 735 aaPredicted RBP9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CROCCP2Q86T23 111 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 PHF13Q86YI8 300 aaPredicted RBP9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 WDR49Q8IV35 697 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ZBTB8OSQ8IWT0 167 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 EXOC8Q8IYI6 725 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CCDC105Q8IYK2 499 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 TCP11Q8WWU5 503 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CPA5Q8WXQ8 436 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 VCPIP1Q96JH7 1222 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 MRPL4Q9BYD3 311 aaKnown RBP9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CCDC113Q9H0I3 377 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 EPN3Q9H201 632 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 CENPHQ9H3R5 247 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 ANKFY1Q9P2R3 1169 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 LCMT1Q9UIC8 334 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 SCINQ9Y6U3 715 aa9.97□□□□□ -0.81
CDK5RAP3-208ENST00000578525 A0A0G2JLL6 359 aaPredicted RBP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 EBAG9O00559 213 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CLDN3O15551 220 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 THAP12O43422 761 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PSTPIP1O43586 416 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SLC25A27O95847 323 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PRKCBP05771 671 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 HARSP12081 509 aaKnown RBP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 GNA15P30679 374 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TCF7P36402 384 aaPredicted RBP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 IREB2P48200 963 aaKnown RBP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CDR1P51861 262 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ZNF132P52740 706 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CORO7P57737 925 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 GUCY1A3Q02108 690 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 C1QBPQ07021 282 aaKnown RBP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 NCOA4Q13772 614 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SLMAPQ14BN4 828 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 R3HDM1Q15032 1099 aaKnown RBP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 SGO2Q562F6 1265 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 DENND2CQ68D51 928 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CDCA2Q69YH5 1023 aaPredicted RBP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 KCNV1Q6PIU1 500 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TMEM270Q6UE05 265 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 B4GALNT4Q76KP1 1039 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PRRT2Q7Z6L0 340 aaPredicted RBP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 NLGN2Q8NFZ4 835 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 OR5B17Q8NGF7 314 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 FBXO25Q8TCJ0 367 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CNKSR2Q8WXI2 1034 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 BBXQ8WY36 941 aaPredicted RBP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 ART4Q93070 314 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 DCPSQ96C86 337 aaKnown RBP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TLCD1Q96CP7 247 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 CYFIP2Q96F07 1278 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 DDX27Q96GQ7 796 aaKnown RBP9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 C11orf70Q9BRQ4 267 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 PAGR1Q9BTK6 254 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 TMEM109Q9BVC6 243 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 IMPG2Q9BZV3 1241 aa9.96□□□□□ -0.82
CDK5RAP3-208ENST00000578525 C2orf40Q9H1Z8 148 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms