RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 AGO3Q9H9G7 860 aaKnown RBP8.72□□□□□ -1.01
COPS3-215ENST00000578317 ERVK-5Q9HDB9 667 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 AGO2Q9UKV8 859 aaKnown RBP8.72□□□□□ -1.01
COPS3-215ENST00000578317 PADI3Q9ULW8 664 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 ST3GAL5Q9UNP4 418 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 FRMD4BQ9Y2L6 1034 aa8.72□□□□□ -1.01
COPS3-215ENST00000578317 WDR81Q562E7 1941 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 ZNF233A6NK53 670 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 TISP43B9A030 160 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 N4BP3O15049 544 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 KIAA0355O15063 1070 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 OGTO15294 1046 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 B4GALT5O43286 388 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 ZNF623O75123 536 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 CXCL10P02778 98 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 ADRB2P07550 413 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 CLTBP09497 229 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 CTSHP09668 335 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 CDK11BP21127 795 aaKnown RBP8.71□□□□□ -1.02
COPS3-215ENST00000578317 PPP2R3AQ06190 1150 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 MBTPS1Q14703 1052 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 GPNMBQ14956 572 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 DCAF4L1Q3SXM0 396 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 C16orf46Q6P387 395 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 SLC27A1Q6PCB7 646 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 CRELD2Q6UXH1 353 aaPredicted RBP8.71□□□□□ -1.02
COPS3-215ENST00000578317 INTS8Q75QN2 995 aaKnown RBP8.71□□□□□ -1.02
COPS3-215ENST00000578317 APTXQ7Z2E3 356 aaKnown RBP8.71□□□□□ -1.02
COPS3-215ENST00000578317 TRIM59Q8IWR1 403 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 GPD1LQ8N335 351 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 EEF2KMTQ96G04 330 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 MFSD14AQ96MC6 490 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 ADPGKQ9BRR6 497 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 HIPK3Q9H422 1215 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 PDZD7Q9H5P4 517 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 GRPEL1Q9HAV7 217 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 TMEM39AQ9NV64 488 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 MAGEC2Q9UBF1 373 aaPredicted RBP8.71□□□□□ -1.02
COPS3-215ENST00000578317 USP20Q9Y2K6 914 aa8.71□□□□□ -1.02
COPS3-215ENST00000578317 KCNJ18B7U540 433 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 EPB41P11171 864 aaKnown RBP8.7□□□□□ -1.02
COPS3-215ENST00000578317 ATP1A3P13637 1013 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 FGFR4P22455 802 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 VAMP1P23763 118 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 RFC2P35250 354 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 CASP4P49662 377 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 CYP2J2P51589 502 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 FOXK2Q01167 660 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 PAK2Q13177 524 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 KCNJ12Q14500 433 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 DSC3Q14574 896 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 NOLC1Q14978 699 aaKnown RBP eCLIP8.7□□□□□ -1.02
COPS3-215ENST00000578317 SNRNP35Q16560 246 aaKnown RBP8.7□□□□□ -1.02
COPS3-215ENST00000578317 PLEKHG4Q58EX7 1191 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 EEF1DP3Q658K8 133 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 CEP135Q66GS9 1140 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 USP37Q86T82 979 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 FAM186BQ8IYM0 893 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 ANKRD20A12PQ8NF67 263 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 HPS1Q92902 700 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 ITPKCQ96DU7 683 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 MSTO1Q9BUK6 570 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 FTHL17Q9BXU8 183 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 CDT1Q9H211 546 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 PCIF1Q9H4Z3 704 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 SCHIP1Q9P0W5 487 aaPredicted RBP8.7□□□□□ -1.02
COPS3-215ENST00000578317 ARMCX3Q9UH62 379 aaPredicted RBP8.7□□□□□ -1.02
COPS3-215ENST00000578317 CPSF3Q9UKF6 684 aaKnown RBP8.7□□□□□ -1.02
COPS3-215ENST00000578317 ATP11BQ9Y2G3 1177 aa8.7□□□□□ -1.02
COPS3-215ENST00000578317 A0A0U1RQF3 1178 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 A0A1W2PRU2 124 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 PMM2O15305 246 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 NDUFB5O43674 189 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 NBNO60934 754 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 TIMP1P01033 207 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 CLTAP09496 248 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 GHRP10912 638 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 ZSCAN20P17040 1043 aaPredicted RBP8.69□□□□□ -1.02
COPS3-215ENST00000578317 MPSTP25325 297 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 CD52P31358 61 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 FAM189BP81408 668 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 FANCCQ00597 558 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 NFX1Q12986 1120 aaKnown RBP8.69□□□□□ -1.02
COPS3-215ENST00000578317 KRT31Q15323 416 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 SURF1Q15526 300 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 ZNF568Q3ZCX4 644 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 UBXN11Q5T124 520 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 MRPL10Q7Z7H8 261 aaKnown RBP8.69□□□□□ -1.02
COPS3-215ENST00000578317 PARD3BQ8TEW8 1205 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 APBB2Q92870 758 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 CPB2Q96IY4 423 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 CNOT6LQ96LI5 555 aaKnown RBP8.69□□□□□ -1.02
COPS3-215ENST00000578317 TSPAN18Q96SJ8 248 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 FAM213AQ9BRX8 229 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 TUBGCP2Q9BSJ2 902 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 RBCK1Q9BYM8 510 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 IFIH1Q9BYX4 1025 aaKnown RBP8.69□□□□□ -1.02
COPS3-215ENST00000578317 OSBPL7Q9BZF2 842 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 TMX1Q9H3N1 280 aa8.69□□□□□ -1.02
COPS3-215ENST00000578317 PLEKHA5Q9HAU0 1116 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms