RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 PRPHP41219 470 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 VARS2Q5ST30 1063 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 ITFG1Q8TB96 612 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 SPIRE2Q8WWL2 714 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 IRF7Q92985 503 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 RMDN1Q96DB5 314 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 SUSD3Q96L08 255 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 ACO2Q99798 780 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 RTKNQ9BST9 563 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 FOXQ1Q9C009 403 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 PLEKHA5Q9HAU0 1116 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 ARHGAP28Q9P2N2 729 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 ZMYM5Q9UJ78 669 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 CACNA1HO95180 2353 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 NOTCH4Q99466 2003 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 SMIM28A0A1B0GU29 152 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 CYP3A5P20815 502 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 MCM7P33993 719 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 CNR2P34972 360 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 ROR1Q01973 937 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 ADCY1Q08828 1119 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 DMP1Q13316 513 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 SPECC1Q5M775 1068 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 TTC38Q5R3I4 469 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 EEF1DP3Q658K8 133 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 ZNF280DQ6N043 979 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 NOSTRINQ8IVI9 506 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 GLYCTKQ8IVS8 523 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 ZSCAN31Q96LW9 406 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 NTPCRQ9BSD7 190 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 CHRDQ9H2X0 955 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 NCDNQ9UBB6 729 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 AFF4Q9UHB7 1163 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 PCDHB8Q9UN66 801 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 PODXLO00592 558 aa12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 ADAM12O43184 909 aa12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 CCT6AP40227 531 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 CLCNKBP51801 687 aa12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 NTHL1P78549 312 aa12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 SNW1Q13573 536 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 UBXN2BQ14CS0 331 aa12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 CYP4A22Q5TCH4 519 aa12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 MPZL3Q6UWV2 235 aa12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 TPRG1Q6ZUI0 275 aa12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 CDR2LQ86X02 465 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 BEST2Q8NFU1 509 aa12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 C8orf76Q96K31 380 aa12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 ACAP3Q96P50 834 aa12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 CDT1Q9H211 546 aa12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 ZFP14Q9HCL3 533 aa12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 OBP2AQ9NY56 170 aa12.31□□□□□ -0.44
SMARCE1-214ENST00000578112 XPOTO43592 962 aaKnown RBP12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 GUCY2CP25092 1073 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 TKTP29401 623 aaKnown RBP12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 CCR3P51677 355 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 IQCEQ6IPM2 695 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 ZPBP2Q6X784 338 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 ZNF687Q8N1G0 1237 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 IGSF22Q8N9C0 903 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 HASPINQ8TF76 798 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 RPP25Q9BUL9 199 aaKnown RBP12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 C8orf33Q9H7E9 229 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 LRWD1Q9UFC0 647 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 INSL5Q9Y5Q6 135 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 WDR27A2RRH5 827 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 LRRC32Q14392 662 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 ZNF568Q3ZCX4 644 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 PDZD4Q76G19 769 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 CELF5Q8N6W0 485 aaKnown RBP12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 TRMT61BQ9BVS5 477 aaKnown RBP12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 SH2B1Q9NRF2 756 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 GMEB2Q9UKD1 530 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 POLIQ9UNA4 740 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 DNM3Q9UQ16 869 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 GDAQ9Y2T3 454 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 ASB3Q9Y575 518 aa12.3□□□□□ -0.44
SMARCE1-214ENST00000578112 PRRG1O14668 218 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 TDGF1P13385 188 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 FCARP24071 287 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 TARSP26639 723 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 LRPAP1P30533 357 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 CSTF1Q05048 431 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 HYIQ5T013 277 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 LAIR1Q6GTX8 287 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 MAEAQ7L5Y9 396 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 KIAA2013Q8IYS2 634 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 C4orf32Q8N8J7 132 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 NECAB1Q8N987 351 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 FBXO18Q8NFZ0 1043 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 SMARCD2Q92925 531 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 ZNF512Q96ME7 567 aaPredicted RBP12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 HINFPQ9BQA5 517 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 KXD1Q9BQD3 176 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 LIMCH1Q9UPQ0 1083 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 SMG5Q9UPR3 1016 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 OR6C75A6NL08 312 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 TTLL13PA6NNM8 815 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 SOBPA7XYQ1 873 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 WNT7AO00755 349 aa12.29□□□□□ -0.44
SMARCE1-214ENST00000578112 HOXA6P31267 233 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms