RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 APBB1IPQ7Z5R6 666 aaPredicted RBP17.53■□□□□ 0.4
VAPA-204ENST00000577901 LNX1Q8TBB1 728 aaPredicted RBP17.53■□□□□ 0.4
VAPA-204ENST00000577901 SPIRE2Q8WWL2 714 aa17.53■□□□□ 0.4
VAPA-204ENST00000577901 PIK3R5Q8WYR1 880 aa17.53■□□□□ 0.4
VAPA-204ENST00000577901 ADPGKQ9BRR6 497 aa17.53■□□□□ 0.4
VAPA-204ENST00000577901 SEMA4AQ9H3S1 761 aa17.53■□□□□ 0.4
VAPA-204ENST00000577901 PDZD7Q9H5P4 517 aa17.53■□□□□ 0.4
VAPA-204ENST00000577901 ATP6V1DQ9Y5K8 247 aa17.53■□□□□ 0.4
VAPA-204ENST00000577901 FRYLO94915 3013 aa17.53■□□□□ 0.4
VAPA-204ENST00000577901 NPHP3-ACAD11A0A0J9YXS1 232 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 H0YCG3 227 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 RECQL4O94761 1208 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 HNRNPA1P09651 372 aaKnown RBP eCLIP17.52■□□□□ 0.41e-6■■□□□ 11.6
VAPA-204ENST00000577901 STAT6P42226 847 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 ID4P47928 161 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 NTHL1P78549 312 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 DNM1Q05193 864 aaKnown RBP17.52■□□□□ 0.4
VAPA-204ENST00000577901 PPM1LQ5SGD2 360 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 SV2BQ7L1I2 683 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 LRRC15Q8TF66 581 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 REEP2Q9BRK0 252 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 PANK2Q9BZ23 570 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 CXCL16Q9H2A7 254 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 DLGAP2Q9P1A6 1054 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 ARHGAP28Q9P2N2 729 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 CDH7Q9ULB5 785 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 R4GN57 208 aa17.52■□□□□ 0.4
VAPA-204ENST00000577901 MTCL1Q9Y4B5 1905 aaKnown RBP17.52■□□□□ 0.4
VAPA-204ENST00000577901 SPTBN4Q9H254 2564 aa17.52■□□□□ 0.39
VAPA-204ENST00000577901 PTPRZ1P23471 2315 aaPredicted RBP17.52■□□□□ 0.39
VAPA-204ENST00000577901 MYH15Q9Y2K3 1946 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 SLC16A4O15374 487 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 FAM13AO94988 1023 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 LMNAP02545 664 aaKnown RBP17.51■□□□□ 0.39
VAPA-204ENST00000577901 C8AP07357 584 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 ME1P48163 572 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 ELAVL2Q12926 359 aaKnown RBP17.51■□□□□ 0.39
VAPA-204ENST00000577901 STRN3Q13033 797 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 NAB2Q15742 525 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 ATF7IP2Q5U623 682 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 PDXDC1Q6P996 788 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 PARM1Q6UWI2 310 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 ERMP1Q7Z2K6 904 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 MYCT1Q8N699 235 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 FGF14Q92915 247 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 RPP25Q9BUL9 199 aaKnown RBP17.51■□□□□ 0.39
VAPA-204ENST00000577901 MRPL4Q9BYD3 311 aaKnown RBP17.51■□□□□ 0.39
VAPA-204ENST00000577901 ZHX3Q9H4I2 956 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 PARVGQ9HBI0 331 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 RCOR1Q9UKL0 485 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 USP20Q9Y2K6 914 aa17.51■□□□□ 0.39
VAPA-204ENST00000577901 RIF1Q5UIP0 2472 aaKnown RBP17.5■□□□□ 0.39
VAPA-204ENST00000577901 CCL16O15467 120 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 ADAM12O43184 909 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 TBCAO75347 108 aaKnown RBP17.5■□□□□ 0.39
VAPA-204ENST00000577901 SCP2P22307 547 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 HOXA9P31269 272 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 GPC5P78333 572 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 KRT85P78386 507 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 DCAF4L1Q3SXM0 396 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 NT5DC1Q5TFE4 455 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 C1orf210Q8IVY1 113 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 PJA1Q8NG27 643 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 FGF13Q92913 245 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 SHDQ96IW2 340 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 FOXQ1Q9C009 403 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 POLIQ9UNA4 740 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 TNFSF13BQ9Y275 285 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 ZDHHC9Q9Y397 364 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 DOCK8Q8NF50 2099 aa17.5■□□□□ 0.39
VAPA-204ENST00000577901 DMXL1Q9Y485 3027 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 XYLBO75191 536 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 EDN1P05305 212 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 SP9P0CG40 484 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 ABCD1P33897 745 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 STARD6P59095 220 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.49■□□□□ 0.39
VAPA-204ENST00000577901 MTSS1LQ765P7 747 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 PDILTQ8N807 584 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 TMEM161BQ8NDZ6 487 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 ITFG1Q8TB96 612 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 SLC7A14Q8TBB6 771 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 LRRC27Q9C0I9 530 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 FAM13BQ9NYF5 915 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 PCDHA7Q9UN72 937 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 GDAQ9Y2T3 454 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 ZNF292O60281 2723 aa17.49■□□□□ 0.39
VAPA-204ENST00000577901 FAM186AA6NE01 2351 aa17.48■□□□□ 0.39
VAPA-204ENST00000577901 TRAK2O60296 914 aa17.48■□□□□ 0.39
VAPA-204ENST00000577901 MAPTP10636 758 aaKnown RBP17.48■□□□□ 0.39
VAPA-204ENST00000577901 GLULP15104 373 aa17.48■□□□□ 0.39
VAPA-204ENST00000577901 FGFR3P22607 806 aa17.48■□□□□ 0.39
VAPA-204ENST00000577901 OR1D2P34982 312 aa17.48■□□□□ 0.39
VAPA-204ENST00000577901 ZNF131P52739 623 aa17.48■□□□□ 0.39
VAPA-204ENST00000577901 NCKAP1LP55160 1127 aa17.48■□□□□ 0.39
VAPA-204ENST00000577901 SNW1Q13573 536 aaKnown RBP17.48■□□□□ 0.39
VAPA-204ENST00000577901 RAB33AQ14088 237 aa17.48■□□□□ 0.39
VAPA-204ENST00000577901 AXDND1Q5T1B0 1012 aaPredicted RBP17.48■□□□□ 0.39
VAPA-204ENST00000577901 EEF1DP3Q658K8 133 aa17.48■□□□□ 0.39
VAPA-204ENST00000577901 ZC3H14Q6PJT7 736 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms