RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 POLR3GO15318 223 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 HIP1RO75146 1068 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 INHBAP08476 426 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 SELPP16109 830 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 TAC1P20366 129 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 MX2P20592 715 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 SKP1P63208 163 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 BASP1P80723 227 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 NSUN2Q08J23 767 aaKnown RBP eCLIP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 FNDC3BQ53EP0 1204 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 DACT2Q5SW24 774 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 FAM102AQ5T9C2 384 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 OVOS1Q6IE37 1185 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 ERAP2Q6P179 960 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 MOB2Q70IA6 237 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CCDC186Q7Z3E2 898 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 TXNRD3Q86VQ6 643 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 ENAHQ8N8S7 591 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 TTC13Q8NBP0 860 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 TRPM4Q8TD43 1214 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 ARHGEF26Q96DR7 871 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 PABPC5Q96DU9 382 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CCDC51Q96ER9 411 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 C16orf45Q96MC5 204 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 RPRD1AQ96P16 312 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 POP1Q99575 1024 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 GPR63Q9BZJ6 419 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 DHX35Q9H5Z1 703 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 GIMAP4Q9NUV9 329 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 C6orf203Q9P0P8 240 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 KLHL3Q9UH77 587 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 DDX20Q9UHI6 824 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 DNAJC12Q9UKB3 198 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 A0A087WZ62 844 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 UBA6A0AVT1 1052 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CFAP69A5D8W1 941 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 POTEMA6NI47 508 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 SPDYE5A6NIY4 337 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 GSG1L2A8MUP6 293 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 NCK2O43639 380 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 NMT2O60551 498 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 AOC2O75106 756 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CIB2O75838 187 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CCL5P13501 91 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 INSRRP14616 1297 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 PFKFB1P16118 471 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 GCLMP48507 274 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CLCN3P51790 818 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 VAMP7P51809 220 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 FANCCQ00597 558 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 LRRC63Q05C16 580 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 NFIAQ12857 509 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 GPM6BQ13491 265 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 USP41Q3LFD5 358 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 TIGD5Q53EQ6 642 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 TAF1BQ53T94 588 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 EFHC1Q5JVL4 640 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 PLPP4Q5VZY2 271 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 SPOPLQ6IQ16 392 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 ZC3H14Q6PJT7 736 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 TRIM72Q6ZMU5 477 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 KRBA2Q6ZNG9 492 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 MIB1Q86YT6 1006 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 RIOX2Q8IUF8 465 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 UNC45BQ8IWX7 931 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 KLHL7Q8IXQ5 586 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CARNMT1Q8N4J0 409 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 SNX21Q969T3 373 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CNOT6LQ96LI5 555 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 RILPQ96NA2 401 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 NUF2Q9BZD4 464 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 TLR8Q9NR97 1041 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 ELOVL2Q9NXB9 296 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 BFARQ9NZS9 450 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 STAP2Q9UGK3 403 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 SRRDQ9UH36 339 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 TRAV19A0A0A6YYK7 116 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 PDZK1P1A8MUH7 402 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 POTECB2RU33 542 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 E9PMD0 336 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 AP3B1O00203 1094 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CYB561D2O14569 222 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 PPP1R12AO14974 1030 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 ZNF263O14978 683 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 NDUFB5O43674 189 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 ERN1O75460 977 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 ALPPL2P10696 532 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 AMD1P17707 334 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CCNE1P24864 410 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 GUCY2CP25092 1073 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 HALP42357 657 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 CAPZA2P47755 286 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 SULT1E1P49888 294 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 LBRQ14739 615 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 C16orf72Q14CZ0 275 aa3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 SUZ12Q15022 739 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-203ENST00000577880 IMPG1Q17R60 797 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms