RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 DHX37Q8IY37 1157 aaKnown RBP3.6□□□□□ -1.83
TOP2A-202ENST00000577541 PHACTR3Q96KR7 559 aa3.6□□□□□ -1.83
TOP2A-202ENST00000577541 CDC5LQ99459 802 aaKnown RBP3.6□□□□□ -1.83
TOP2A-202ENST00000577541 ZSWIM1Q9BR11 485 aa3.6□□□□□ -1.83
TOP2A-202ENST00000577541 UNKLQ9H9P5 680 aaKnown RBP3.6□□□□□ -1.83
TOP2A-202ENST00000577541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.6□□□□□ -1.83
TOP2A-202ENST00000577541 SPTLC3Q9NUV7 552 aa3.6□□□□□ -1.83
TOP2A-202ENST00000577541 MDFICQ9P1T7 246 aa3.6□□□□□ -1.83
TOP2A-202ENST00000577541 MSRAQ9UJ68 235 aa3.6□□□□□ -1.83
TOP2A-202ENST00000577541 PCDHB6Q9Y5E3 794 aa3.6□□□□□ -1.83
TOP2A-202ENST00000577541 A0A1W2PR48 441 aa3.59□□□□□ -1.83
TOP2A-202ENST00000577541 TLDC2A0PJX2 215 aa3.59□□□□□ -1.83
TOP2A-202ENST00000577541 MYMKA6NI61 221 aa3.59□□□□□ -1.83
TOP2A-202ENST00000577541 ZEB2O60315 1214 aa3.59□□□□□ -1.83
TOP2A-202ENST00000577541 PDE8AO60658 829 aa3.59□□□□□ -1.83
TOP2A-202ENST00000577541 APOL3O95236 402 aa3.59□□□□□ -1.83
TOP2A-202ENST00000577541 CD1AP06126 327 aa3.59□□□□□ -1.83
TOP2A-202ENST00000577541 CKBP12277 381 aa3.59□□□□□ -1.83
TOP2A-202ENST00000577541 MEF2AQ02078 507 aaPredicted RBP3.59□□□□□ -1.83
TOP2A-202ENST00000577541 CNNM4Q6P4Q7 775 aa3.59□□□□□ -1.83
TOP2A-202ENST00000577541 FRMD7Q6ZUT3 714 aa3.59□□□□□ -1.83
TOP2A-202ENST00000577541 RASSF3Q86WH2 238 aa3.59□□□□□ -1.83
TOP2A-202ENST00000577541 FDXACB1Q9BRP7 624 aaPredicted RBP3.59□□□□□ -1.83
TOP2A-202ENST00000577541 ADAM21Q9UKJ8 722 aa3.59□□□□□ -1.83
TOP2A-202ENST00000577541 PPP2R3BQ9Y5P8 575 aa3.59□□□□□ -1.83
TOP2A-202ENST00000577541 ST20-MTHFSA0A0A6YYL1 179 aa3.58□□□□□ -1.84
TOP2A-202ENST00000577541 A0A1B0GTW7 788 aa3.58□□□□□ -1.84
TOP2A-202ENST00000577541 NRP2O60462 931 aa3.58□□□□□ -1.84
TOP2A-202ENST00000577541 TOP3BO95985 862 aaKnown RBP3.58□□□□□ -1.84
TOP2A-202ENST00000577541 HSD3B2P26439 372 aa3.58□□□□□ -1.84
TOP2A-202ENST00000577541 EPHB2P29323 1055 aa3.58□□□□□ -1.84
TOP2A-202ENST00000577541 FHL3Q13643 280 aa3.58□□□□□ -1.84
TOP2A-202ENST00000577541 C21orf62-AS1Q17RA5 79 aa3.58□□□□□ -1.84
TOP2A-202ENST00000577541 ZNF628Q5EBL2 1059 aa3.58□□□□□ -1.84
TOP2A-202ENST00000577541 TAF7LQ5H9L4 462 aa3.58□□□□□ -1.84
TOP2A-202ENST00000577541 KIAA0895LQ68EN5 471 aa3.58□□□□□ -1.84
TOP2A-202ENST00000577541 YTHDF3Q7Z739 585 aaKnown RBP3.58□□□□□ -1.84
TOP2A-202ENST00000577541 C11orf74Q86VG3 221 aa3.58□□□□□ -1.84
TOP2A-202ENST00000577541 SLC5A5Q92911 643 aa3.58□□□□□ -1.84
TOP2A-202ENST00000577541 FERMT2Q96AC1 680 aa3.58□□□□□ -1.84
TOP2A-202ENST00000577541 MARK4Q96L34 752 aa3.58□□□□□ -1.84
TOP2A-202ENST00000577541 TMX1Q9H3N1 280 aa3.58□□□□□ -1.84
TOP2A-202ENST00000577541 APOBEC2Q9Y235 224 aaKnown RBP3.58□□□□□ -1.84
TOP2A-202ENST00000577541 PRSS38A1L453 326 aa3.57□□□□□ -1.84
TOP2A-202ENST00000577541 ULK1O75385 1050 aa3.57□□□□□ -1.84
TOP2A-202ENST00000577541 LATS1O95835 1130 aa3.57□□□□□ -1.84
TOP2A-202ENST00000577541 VIL1P09327 827 aaKnown RBP3.57□□□□□ -1.84
TOP2A-202ENST00000577541 GYS2P54840 703 aa3.57□□□□□ -1.84
TOP2A-202ENST00000577541 SART3Q15020 963 aaKnown RBP3.57□□□□□ -1.84
TOP2A-202ENST00000577541 C19orf54Q5BKX5 351 aa3.57□□□□□ -1.84
TOP2A-202ENST00000577541 KAZNQ674X7 775 aa3.57□□□□□ -1.84
TOP2A-202ENST00000577541 KRT73Q86Y46 540 aa3.57□□□□□ -1.84
TOP2A-202ENST00000577541 AFAP1L2Q8N4X5 818 aa3.57□□□□□ -1.84
TOP2A-202ENST00000577541 RBMXL3Q8N7X1 1067 aaKnown RBP3.57□□□□□ -1.84
TOP2A-202ENST00000577541 GAB3Q8WWW8 586 aa3.57□□□□□ -1.84
TOP2A-202ENST00000577541 CEP95Q96GE4 821 aa3.57□□□□□ -1.84
TOP2A-202ENST00000577541 PAWRQ96IZ0 340 aaKnown RBP3.57□□□□□ -1.84
TOP2A-202ENST00000577541 GPR101Q96P66 508 aaPredicted RBP3.57□□□□□ -1.84
TOP2A-202ENST00000577541 ORAI2Q96SN7 254 aa3.57□□□□□ -1.84
TOP2A-202ENST00000577541 SPRTNQ9H040 489 aaPredicted RBP3.57□□□□□ -1.84
TOP2A-202ENST00000577541 IFT22Q9H7X7 185 aa3.57□□□□□ -1.84
TOP2A-202ENST00000577541 PRSS50Q9UI38 385 aa3.57□□□□□ -1.84
TOP2A-202ENST00000577541 KDM1AO60341 852 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 PCDH8O95206 1070 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 MYCLP1P12525 358 aaPredicted RBP3.56□□□□□ -1.84
TOP2A-202ENST00000577541 CERS1P27544 350 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 GRIA3P42263 894 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 MCAMP43121 646 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 PLCD1P51178 756 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 MAPK10P53779 464 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 SESN3P58005 492 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 LINC00205P59089 165 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 IL2P60568 153 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 FSCN1Q16658 493 aaKnown RBP3.56□□□□□ -1.84
TOP2A-202ENST00000577541 CYP2A13Q16696 494 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 SLC44A4Q53GD3 710 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 ATXN7L2Q5T6C5 722 aaPredicted RBP3.56□□□□□ -1.84
TOP2A-202ENST00000577541 BROXQ5VW32 411 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 PEG10Q86TG7 708 aaKnown RBP3.56□□□□□ -1.84
TOP2A-202ENST00000577541 GLB1L2Q8IW92 636 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 FBXO18Q8NFZ0 1043 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 OR14C36Q8NHC7 312 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 ACAP3Q96P50 834 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 REXO4Q9GZR2 422 aaKnown RBP3.56□□□□□ -1.84
TOP2A-202ENST00000577541 MS4A5Q9H3V2 200 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 RNPEPQ9H4A4 650 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 CAAP1Q9H8G2 361 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 EVLQ9UI08 416 aaPredicted RBP3.56□□□□□ -1.84
TOP2A-202ENST00000577541 TMA7Q9Y2S6 64 aaKnown RBP3.56□□□□□ -1.84
TOP2A-202ENST00000577541 NOTCH3Q9UM47 2321 aa3.56□□□□□ -1.84
TOP2A-202ENST00000577541 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.55□□□□□ -1.84
TOP2A-202ENST00000577541 K7ESF4 209 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 BRINP1O60477 761 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 TMEM127O75204 238 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 LTA4HP09960 611 aaKnown RBP3.55□□□□□ -1.84
TOP2A-202ENST00000577541 VAV2P52735 878 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 NRG3P56975 720 aa3.55□□□□□ -1.84
TOP2A-202ENST00000577541 TRIM25Q14258 630 aaKnown RBP3.55□□□□□ -1.84
TOP2A-202ENST00000577541 PDCD1Q15116 288 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms