RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 UBXN2AP68543 259 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 MACC1Q6ZN28 852 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 ACAP3Q96P50 834 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 PSTPIP2Q9H939 334 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 NCOA5Q9HCD5 579 aaKnown RBP9.28□□□□□ -0.92
CDH8-203ENST00000577390 SMCO3A2RU48 225 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 TNNI3P19429 210 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 NME3Q13232 169 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 LLGL1Q15334 1064 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 TMED2Q15363 201 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 ZCWPW2Q504Y3 356 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 PI16Q6UXB8 463 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 KDELC2Q7Z4H8 507 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 GLMNQ92990 594 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 VPS50Q96JG6 964 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 MRPL39Q9NYK5 338 aaKnown RBP9.28□□□□□ -0.92
CDH8-203ENST00000577390 UBE4BO95155 1302 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 CLRN2A0PK11 232 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 PHF20L1A8MW92 1017 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 SNX4O95219 450 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 R3HDM1Q15032 1099 aaKnown RBP9.28□□□□□ -0.92
CDH8-203ENST00000577390 EXOC3L4Q17RC7 722 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 TRIM65Q6PJ69 517 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 NARS2Q96I59 477 aaKnown RBP9.28□□□□□ -0.92
CDH8-203ENST00000577390 BTG4Q9NY30 223 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 ERAP1Q9NZ08 941 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 ADA2Q9NZK5 511 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 FBXO10Q9UK96 956 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 VAV3Q9UKW4 847 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 RABL2BQ9UNT1 228 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 CHURC1-FNTBB4DL54 471 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 ADCY6O43306 1168 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 MYBL1P10243 752 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 KITP10721 976 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 HSD3B1P14060 373 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 JAK1P23458 1154 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 RFC5P40937 340 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 HNMTP50135 292 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 BTNL9Q6UXG8 535 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 OR6P1Q8NGX9 317 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 GGT7Q9UJ14 662 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 IL15P40933 162 aaPredicted RBP9.28□□□□□ -0.92
CDH8-203ENST00000577390 COLEC12Q5KU26 742 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 AGBL2Q5U5Z8 902 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 ANKRD40Q6AI12 368 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 OR6B2Q6IFH4 312 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 CYP4F22Q6NT55 531 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 DPH5Q9H2P9 285 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 PANK4Q9NVE7 773 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 PCDHGC5Q9Y5F6 944 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 PLB1Q6P1J6 1458 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 SERPINB10P48595 397 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 CLCA4Q14CN2 919 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 TRIM72Q6ZMU5 477 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 ZNF227Q86WZ6 799 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 SLFN12Q8IYM2 578 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 GAL3ST3Q96A11 431 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 CLIC6Q96NY7 704 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 ANAPC7Q9UJX3 599 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 PCDHA12Q9UN75 941 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 ATF5Q9Y2D1 282 aaPredicted RBP9.28□□□□□ -0.92
CDH8-203ENST00000577390 MED14O60244 1454 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 IFT140Q96RY7 1462 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 O00370 1275 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 EPN2O95208 641 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 SLC7A5Q01650 507 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 DHX34Q14147 1143 aaKnown RBP9.27□□□□□ -0.92
CDH8-203ENST00000577390 CATSPER4Q7RTX7 472 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 RIN2Q8WYP3 895 aaPredicted RBP9.27□□□□□ -0.92
CDH8-203ENST00000577390 GINM1Q9NU53 330 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 NOVA2Q9UNW9 492 aaKnown RBP9.27□□□□□ -0.92
CDH8-203ENST00000577390 HIST1H2AGP0C0S8 130 aaPredicted RBP9.27□□□□□ -0.92
CDH8-203ENST00000577390 HIST1H2ADP20671 130 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 SEC24CP53992 1094 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 CSNK2BP67870 215 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 TDRPQ86YL5 185 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 MICALL2Q8IY33 904 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 TRMT44Q8IYL2 757 aaKnown RBP9.27□□□□□ -0.92
CDH8-203ENST00000577390 SNX31Q8N9S9 440 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 HIST1H2AHQ96KK5 128 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 HIST1H2AJQ99878 128 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 H2AFJQ9BTM1 129 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 PPP2R3BQ9Y5P8 575 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 RPS6KL1Q9Y6S9 549 aa9.27□□□□□ -0.92
CDH8-203ENST00000577390 FANCAO15360 1455 aa9.27□□□□□ -0.93
CDH8-203ENST00000577390 BUB1O43683 1085 aa9.27□□□□□ -0.93
CDH8-203ENST00000577390 ZFYVE9O95405 1425 aa9.27□□□□□ -0.93
CDH8-203ENST00000577390 TWF1Q12792 350 aa9.27□□□□□ -0.93
CDH8-203ENST00000577390 MESDQ14696 234 aa9.27□□□□□ -0.93
CDH8-203ENST00000577390 ERFEQ4G0M1 354 aa9.27□□□□□ -0.93
CDH8-203ENST00000577390 RASGRP2Q7LDG7 609 aa9.27□□□□□ -0.93
CDH8-203ENST00000577390 PLD3Q8IV08 490 aa9.27□□□□□ -0.93
CDH8-203ENST00000577390 SH3GL2Q99962 352 aa9.27□□□□□ -0.93
CDH8-203ENST00000577390 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.27□□□□□ -0.93
CDH8-203ENST00000577390 NDUFB9Q9Y6M9 179 aa9.27□□□□□ -0.93
CDH8-203ENST00000577390 RNASEH1O60930 286 aaKnown RBP9.27□□□□□ -0.93
CDH8-203ENST00000577390 MOCS2O96007 188 aaPredicted RBP9.27□□□□□ -0.93
CDH8-203ENST00000577390 CD151P48509 253 aa9.27□□□□□ -0.93
CDH8-203ENST00000577390 EFTUD2Q15029 972 aaKnown RBP eCLIP9.27□□□□□ -0.93
CDH8-203ENST00000577390 TAF8Q7Z7C8 310 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms