RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 ELF1P32519 619 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 SF3A1Q15459 793 aaKnown RBP16.3■□□□□ 0.2
MKS1-205ENST00000577315 SLC10A6Q3KNW5 377 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 ARSHQ5FYA8 562 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 SLC8B1Q6J4K2 584 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 MTSS1LQ765P7 747 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 GPBP1Q86WP2 473 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 MYCT1Q8N699 235 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 TMEM105Q8N8V8 129 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 FLCNQ8NFG4 579 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 ZNF461Q8TAF7 563 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 ATOH1Q92858 354 aaPredicted RBP16.3■□□□□ 0.2
MKS1-205ENST00000577315 REEP2Q9BRK0 252 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 CCSER1Q9C0I3 900 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 PARVGQ9HBI0 331 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 KCNH3Q9ULD8 1083 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 POLIQ9UNA4 740 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 ANK1P16157 1881 aa16.3■□□□□ 0.2
MKS1-205ENST00000577315 MIA3Q5JRA6 1907 aa16.29■□□□□ 0.2
MKS1-205ENST00000577315 VPS37CA5D8V6 355 aaPredicted RBP16.29■□□□□ 0.2
MKS1-205ENST00000577315 CCL16O15467 120 aa16.29■□□□□ 0.2
MKS1-205ENST00000577315 TRAK2O60296 914 aa16.29■□□□□ 0.2
MKS1-205ENST00000577315 PIGRP01833 764 aa16.29■□□□□ 0.2
MKS1-205ENST00000577315 CYP3A5P20815 502 aa16.29■□□□□ 0.2
MKS1-205ENST00000577315 LIG4P49917 911 aa16.29■□□□□ 0.2
MKS1-205ENST00000577315 ZNF131P52739 623 aa16.29■□□□□ 0.2
MKS1-205ENST00000577315 VARS2Q5ST30 1063 aaKnown RBP16.29■□□□□ 0.2
MKS1-205ENST00000577315 APPL2Q8NEU8 664 aa16.29■□□□□ 0.2
MKS1-205ENST00000577315 RSAD2Q8WXG1 361 aa16.29■□□□□ 0.2
MKS1-205ENST00000577315 RAD54LQ92698 747 aa16.29■□□□□ 0.2
MKS1-205ENST00000577315 SUSD3Q96L08 255 aa16.29■□□□□ 0.2
MKS1-205ENST00000577315 OXCT2Q9BYC2 517 aaPredicted RBP16.29■□□□□ 0.2
MKS1-205ENST00000577315 MAFFQ9ULX9 164 aa16.29■□□□□ 0.2
MKS1-205ENST00000577315 UBQLN1Q9UMX0 589 aaKnown RBP16.29■□□□□ 0.2
MKS1-205ENST00000577315 TCHHQ07283 1943 aa16.29■□□□□ 0.2
MKS1-205ENST00000577315 NPHP3-ACAD11A0A0J9YXS1 232 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 K7ENM7 598 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 HNRNPDLO14979 420 aaKnown RBP16.28■□□□□ 0.2
MKS1-205ENST00000577315 NARSO43776 548 aaKnown RBP16.28■□□□□ 0.2
MKS1-205ENST00000577315 TBCAO75347 108 aaKnown RBP16.28■□□□□ 0.2
MKS1-205ENST00000577315 ABLIM3O94929 683 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 LRG1P02750 347 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 RFX1P22670 979 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 IGFBP6P24592 240 aaPredicted RBP16.28■□□□□ 0.2
MKS1-205ENST00000577315 LRPAP1P30533 357 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 MCM4P33991 863 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 ROR1Q01973 937 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 CACNB1Q02641 598 aaPredicted RBP16.28■□□□□ 0.2
MKS1-205ENST00000577315 PPP2R3AQ06190 1150 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 HTR4Q13639 388 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 MRPL58Q14197 206 aaKnown RBP16.28■□□□□ 0.2
MKS1-205ENST00000577315 DHX8Q14562 1220 aaKnown RBP16.28■□□□□ 0.2
MKS1-205ENST00000577315 KARSQ15046 597 aaKnown RBP16.28■□□□□ 0.2
MKS1-205ENST00000577315 TPGS2Q68CL5 300 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 CWF19L1Q69YN2 538 aaKnown RBP16.28■□□□□ 0.2
MKS1-205ENST00000577315 ZNF280DQ6N043 979 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 CD302Q8IX05 232 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 SIX5Q8N196 739 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 LARP4BQ92615 738 aaKnown RBP16.28■□□□□ 0.2
MKS1-205ENST00000577315 AVENQ9NQS1 362 aaPredicted RBP16.28■□□□□ 0.2
MKS1-205ENST00000577315 SLC2A4RGQ9NR83 387 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 BLOC1S4Q9NUP1 217 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 CCDC39Q9UFE4 941 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 TBX20Q9UMR3 447 aa16.28■□□□□ 0.2
MKS1-205ENST00000577315 TTC26A0AVF1 554 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 ARHGEF37A1IGU5 675 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 H0Y858 1186 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 I3L4J1 428 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 OGTO15294 1046 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 TBC1D4O60343 1298 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 CFHP08603 1231 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 CXCL8P10145 99 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 ATF2P15336 505 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 NPR3P17342 541 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 PLCG1P19174 1290 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 PAX3P23760 479 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 MARCKSP29966 332 aaPredicted RBP16.27■□□□□ 0.2
MKS1-205ENST00000577315 DDIT3P35638 169 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 MCM6Q14566 821 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 PABPC1LQ4VXU2 614 aaKnown RBP16.27■□□□□ 0.2
MKS1-205ENST00000577315 RSPO2Q6UXX9 243 aaPredicted RBP16.27■□□□□ 0.2
MKS1-205ENST00000577315 KRI1Q8N9T8 703 aaKnown RBP16.27■□□□□ 0.2
MKS1-205ENST00000577315 FGF13Q92913 245 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 C18orf25Q96B23 403 aaPredicted RBP16.27■□□□□ 0.2
MKS1-205ENST00000577315 KIF12Q96FN5 646 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 INTS4Q96HW7 963 aaKnown RBP16.27■□□□□ 0.2
MKS1-205ENST00000577315 RPF1Q9H9Y2 349 aaKnown RBP16.27■□□□□ 0.2
MKS1-205ENST00000577315 STK17AQ9UEE5 414 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 PCDHB8Q9UN66 801 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 NUMBLQ9Y6R0 609 aa16.27■□□□□ 0.2
MKS1-205ENST00000577315 WDR27A2RRH5 827 aa16.26■□□□□ 0.19
MKS1-205ENST00000577315 PRRG1O14668 218 aa16.26■□□□□ 0.19
MKS1-205ENST00000577315 PTPN2P17706 415 aa16.26■□□□□ 0.19
MKS1-205ENST00000577315 TXLNAP40222 546 aa16.26■□□□□ 0.19
MKS1-205ENST00000577315 NTHL1P78549 312 aa16.26■□□□□ 0.19
MKS1-205ENST00000577315 GTF2BQ00403 316 aa16.26■□□□□ 0.19
MKS1-205ENST00000577315 CTXN3Q4LDR2 81 aa16.26■□□□□ 0.19
MKS1-205ENST00000577315 SEZ6Q53EL9 994 aa16.26■□□□□ 0.19
MKS1-205ENST00000577315 PHLDB3Q6NSJ2 640 aa16.26■□□□□ 0.19
MKS1-205ENST00000577315 TCEAL8Q8IYN2 117 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms