RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 CBWD5Q5RIA9 395 aa18.89■□□□□ 0.62
ATPAF1-214ENST00000576409 MCPH1Q8NEM0 835 aa18.89■□□□□ 0.62
ATPAF1-214ENST00000576409 NLRP7Q8WX94 980 aa18.89■□□□□ 0.62
ATPAF1-214ENST00000576409 RTFDC1Q9BY42 306 aaPredicted RBP18.89■□□□□ 0.62
ATPAF1-214ENST00000576409 RIOX1Q9H6W3 641 aa18.89■□□□□ 0.62
ATPAF1-214ENST00000576409 IP6K2Q9UHH9 426 aa18.89■□□□□ 0.62
ATPAF1-214ENST00000576409 NVLO15381 856 aaKnown RBP18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 RARAP10276 462 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 CASP2P42575 452 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 SLC20A2Q08357 652 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 TNFAIP1Q13829 316 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 KLHL38Q2WGJ6 581 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 KAT2BQ92831 832 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 ATP6V0A4Q9HBG4 840 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 TBC1D22BQ9NU19 505 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 POLRMTO00411 1230 aaKnown RBP18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 TLR2O60603 784 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 KCNJ2P63252 427 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 PPATQ06203 517 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 CYP4A22Q5TCH4 519 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 SNRNP48Q6IEG0 339 aaKnown RBP18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 PRUNE1Q86TP1 453 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 RASSF3Q86WH2 238 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 ST13P4Q8IZP2 240 aaPredicted RBP18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 INPP4AQ96PE3 977 aaPredicted RBP18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 TRIM56Q9BRZ2 755 aaKnown RBP18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 TLK1Q9UKI8 766 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 NAALADL1Q9UQQ1 740 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 FOXO6A8MYZ6 492 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 GJB6O95452 261 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 MKRN3Q13064 507 aaKnown RBP18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 DAB2IPQ5VWQ8 1189 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 KRT80Q6KB66 452 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 FGD4Q96M96 766 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 KCNH7Q9NS40 1196 aa18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.89■□□□□ 0.61
ATPAF1-214ENST00000576409 FAM86B1E9PN63 330 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 EML1O00423 815 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 FAM86B2P0C5J1 330 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 KRT3P12035 628 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 NPR1P16066 1061 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 ORC1Q13415 861 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 TMEM259Q4ZIN3 620 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 CCDC125Q86Z20 511 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 ARID3BQ8IVW6 561 aaPredicted RBP18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 SUGP1Q8IWZ8 645 aaKnown RBP18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 RBBP8NLQ8NC74 664 aaPredicted RBP18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 MORC4Q8TE76 937 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 ROPN1BQ9BZX4 212 aaPredicted RBP18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 ROPN1Q9HAT0 212 aaPredicted RBP18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 HEY2Q9UBP5 337 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 ZWINTO95229 277 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 HLA-DRAP01903 254 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 KCNA3P22001 575 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 CCND2P30279 289 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 ARL4AP40617 200 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 SERPINB4P48594 390 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 ALDH5A1P51649 535 aaPredicted RBP18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 SLC30A9Q6PML9 568 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 CCNYL1Q8N7R7 359 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 LRGUKQ96M69 825 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 KLC2Q9H0B6 622 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 PARVAQ9NVD7 372 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 POLLQ9UGP5 575 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 GTF3C4Q9UKN8 822 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 TRIM33Q9UPN9 1127 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 KIF3CO14782 793 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 SLC4A1P02730 911 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 GARSP41250 739 aaKnown RBP18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 RANBP1P43487 201 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 RCN1Q15293 331 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 ECM1Q16610 540 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 RYBPQ8N488 228 aaPredicted RBP18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 FAM111AQ96PZ2 611 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 IVNS1ABPQ9Y6Y0 642 aa18.88■□□□□ 0.61
ATPAF1-214ENST00000576409 M0QYV0 167 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 RPS6KA5O75582 802 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 FSBPO95073 299 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 RBP3P10745 1247 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 RGS7P49802 495 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 THOC5Q13769 683 aaKnown RBP18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 AGGF1Q8N302 714 aaeCLIP18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 OR6B3Q8NGW1 331 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 BCAP29Q9UHQ4 241 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 PCDHA10Q9Y5I2 948 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 NEURL4Q96JN8 1562 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 GOLGA4Q13439 2230 aaKnown RBP18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 RIC1Q4ADV7 1423 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 CBX6O95503 412 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 CYP11B1P15538 503 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 RFX1P22670 979 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 SLC12A1Q13621 1099 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 MTDHQ86UE4 582 aaKnown RBP18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 TNFRSF25Q93038 417 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 HDAC11Q96DB2 347 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 TARS2Q9BW92 718 aaKnown RBP18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 TBX3O15119 743 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 RIPK2O43353 540 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 LMNAP02545 664 aaKnown RBP18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 CALB1P05937 261 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms