RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 MEIS3P2A8K0S8 358 aa17.77■□□□□ 0.44
ERCC4-208ENST00000576348 ITGB3P05106 788 aa17.77■□□□□ 0.44
ERCC4-208ENST00000576348 SCNN1GP51170 649 aa17.77■□□□□ 0.44
ERCC4-208ENST00000576348 GSDMDP57764 484 aa17.77■□□□□ 0.44
ERCC4-208ENST00000576348 KCNMA1Q12791 1236 aa17.77■□□□□ 0.44
ERCC4-208ENST00000576348 TCTN1Q2MV58 587 aa17.77■□□□□ 0.44
ERCC4-208ENST00000576348 TSR1Q2NL82 804 aaKnown RBP17.77■□□□□ 0.44
ERCC4-208ENST00000576348 ZNF699Q32M78 642 aa17.77■□□□□ 0.44
ERCC4-208ENST00000576348 XKR4Q5GH76 650 aa17.77■□□□□ 0.44
ERCC4-208ENST00000576348 NPAS4Q8IUM7 802 aa17.77■□□□□ 0.44
ERCC4-208ENST00000576348 HELQQ8TDG4 1101 aa17.77■□□□□ 0.44
ERCC4-208ENST00000576348 C18orf25Q96B23 403 aaPredicted RBP17.77■□□□□ 0.44
ERCC4-208ENST00000576348 ZMAT2Q96NC0 199 aaKnown RBP17.77■□□□□ 0.44
ERCC4-208ENST00000576348 TUBGCP4Q9UGJ1 667 aa17.77■□□□□ 0.44
ERCC4-208ENST00000576348 ZMYND8Q9ULU4 1186 aaPredicted RBP17.77■□□□□ 0.44
ERCC4-208ENST00000576348 LUC7L2Q9Y383 392 aaKnown RBP17.77■□□□□ 0.44
ERCC4-208ENST00000576348 COQ4Q9Y3A0 265 aa17.77■□□□□ 0.44
ERCC4-208ENST00000576348 ZBBXA8MT70 800 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 AKR1B15C9JRZ8 316 aaPredicted RBP17.76■□□□□ 0.43
ERCC4-208ENST00000576348 ZC3H11AO75152 810 aaKnown RBP eCLIP17.76■□□□□ 0.43
ERCC4-208ENST00000576348 BAIAP3O94812 1187 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 POMCP01189 267 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 FGFR1P11362 822 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 SYN1P17600 705 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 CYP3A5P20815 502 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 RFX1P22670 979 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 POLR2BP30876 1174 aaKnown RBP17.76■□□□□ 0.43
ERCC4-208ENST00000576348 GUCY2FP51841 1108 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 POLR2FP61218 127 aaKnown RBP17.76■□□□□ 0.43
ERCC4-208ENST00000576348 RNASELQ05823 741 aaKnown RBP17.76■□□□□ 0.43
ERCC4-208ENST00000576348 MYO1EQ12965 1108 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 GRIK3Q13003 919 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 SGSM1Q2NKQ1 1148 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 NOMO2Q5JPE7 1267 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 KLHDC7AQ5VTJ3 777 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 CNGA4Q8IV77 575 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 C1orf127Q8N9H9 656 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 SEMA4DQ92854 862 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 PDLIM2Q96JY6 352 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 FAM81BQ96LP2 452 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 SPAG5Q96R06 1193 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 PPP1R9BQ96SB3 815 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 KANSL3Q9P2N6 904 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 APEX2Q9UBZ4 518 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 AGAP1Q9UPQ3 857 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 DAAM1Q9Y4D1 1078 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 NR2E3Q9Y5X4 410 aa17.76■□□□□ 0.43
ERCC4-208ENST00000576348 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.75■□□□□ 0.43
ERCC4-208ENST00000576348 PTGESO14684 152 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 NRDCO43847 1150 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 OFD1O75665 1012 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 UPP2O95045 317 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 VNN1O95497 513 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 FGBP02675 491 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 P4HA1P13674 534 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 ATICP31939 592 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 MYL6P60660 151 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 RAPGEF1Q13905 1077 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 FIGNQ5HY92 759 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 PSRC1Q6PGN9 363 aaPredicted RBP17.75■□□□□ 0.43
ERCC4-208ENST00000576348 PPM1KQ8N3J5 372 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 TAF4BQ92750 862 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 ZNF560Q96MR9 790 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 FAM193BQ96PV7 902 aaPredicted RBP17.75■□□□□ 0.43
ERCC4-208ENST00000576348 PPP1R10Q96QC0 940 aaKnown RBP17.75■□□□□ 0.43
ERCC4-208ENST00000576348 PI4K2AQ9BTU6 479 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 EDEM3Q9BZQ6 932 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 CXCL16Q9H2A7 254 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 UBE2TQ9NPD8 197 aaPredicted RBP17.75■□□□□ 0.43
ERCC4-208ENST00000576348 NLRC4Q9NPP4 1024 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 CEP72Q9P209 647 aa17.75■□□□□ 0.43
ERCC4-208ENST00000576348 GYPCP04921 128 aa17.74■□□□□ 0.43
ERCC4-208ENST00000576348 UCHL3P15374 230 aa17.74■□□□□ 0.43
ERCC4-208ENST00000576348 CASP14P31944 242 aa17.74■□□□□ 0.43
ERCC4-208ENST00000576348 DEKP35659 375 aaKnown RBP17.74■□□□□ 0.43
ERCC4-208ENST00000576348 MFAP3P55082 362 aa17.74■□□□□ 0.43
ERCC4-208ENST00000576348 NOP14P78316 857 aaKnown RBP17.74■□□□□ 0.43
ERCC4-208ENST00000576348 APBA1Q02410 837 aa17.74■□□□□ 0.43
ERCC4-208ENST00000576348 TBX2Q13207 712 aaPredicted RBP17.74■□□□□ 0.43
ERCC4-208ENST00000576348 ZBTB6Q15916 424 aa17.74■□□□□ 0.43
ERCC4-208ENST00000576348 CLLU1OSQ5K130 101 aa17.74■□□□□ 0.43
ERCC4-208ENST00000576348 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.74■□□□□ 0.43
ERCC4-208ENST00000576348 CCDC186Q7Z3E2 898 aa17.74■□□□□ 0.43
ERCC4-208ENST00000576348 RSPH1Q8WYR4 309 aa17.74■□□□□ 0.43
ERCC4-208ENST00000576348 HPDLQ96IR7 371 aa17.74■□□□□ 0.43
ERCC4-208ENST00000576348 MRPL9Q9BYD2 267 aaKnown RBP17.74■□□□□ 0.43
ERCC4-208ENST00000576348 GANQ9H2C0 597 aa17.74■□□□□ 0.43
ERCC4-208ENST00000576348 ZNHIT6Q9NWK9 470 aaKnown RBP17.74■□□□□ 0.43
ERCC4-208ENST00000576348 DNAJC12Q9UKB3 198 aa17.74■□□□□ 0.43
ERCC4-208ENST00000576348 CAPN11Q9UMQ6 739 aa17.74■□□□□ 0.43
ERCC4-208ENST00000576348 FHOD1Q9Y613 1164 aa17.74■□□□□ 0.43
ERCC4-208ENST00000576348 TANC1Q9C0D5 1861 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 A0A1W2PQJ5 194 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 ASS1P00966 412 aaKnown RBP17.73■□□□□ 0.43
ERCC4-208ENST00000576348 CST3P01034 146 aaPredicted RBP17.73■□□□□ 0.43
ERCC4-208ENST00000576348 TBXAS1P24557 533 aaPredicted RBP17.73■□□□□ 0.43
ERCC4-208ENST00000576348 KRT9P35527 623 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 PNPLA4P41247 253 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 TNNC1P63316 161 aa17.73■□□□□ 0.43
ERCC4-208ENST00000576348 ZBED6P86452 979 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms