RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 GDI1P31150 447 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 EFNA5P52803 228 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 TOB2Q14106 344 aaPredicted RBP9.91□□□□□ -0.82
SMG6-218ENST00000575454 GRM2Q14416 872 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 PPP2R5AQ15172 486 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 CALCRLQ16602 461 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 LPAL2Q16609 132 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 UPP1Q16831 310 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 TPGS2Q68CL5 300 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 PRR23CQ6ZRP0 262 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.91□□□□□ -0.82
SMG6-218ENST00000575454 LONP2Q86WA8 852 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 MAP4K3Q8IVH8 894 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 DEPTORQ8TB45 409 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 ZNF512Q96ME7 567 aaPredicted RBP9.91□□□□□ -0.82
SMG6-218ENST00000575454 AIFM3Q96NN9 605 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 ASB16Q96NS5 453 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 PPP1R10Q96QC0 940 aaKnown RBP9.91□□□□□ -0.82
SMG6-218ENST00000575454 C8orf33Q9H7E9 229 aaPredicted RBP9.91□□□□□ -0.82
SMG6-218ENST00000575454 TTC12Q9H892 705 aaPredicted RBP9.91□□□□□ -0.82
SMG6-218ENST00000575454 CYP4F11Q9HBI6 524 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 TOPORSQ9NS56 1045 aaPredicted RBP9.91□□□□□ -0.82
SMG6-218ENST00000575454 SLC38A7Q9NVC3 462 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 DENND4AQ7Z401 1863 aa9.91□□□□□ -0.82
SMG6-218ENST00000575454 STK36Q9NRP7 1315 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 WDR27A2RRH5 827 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 PRKCBP05771 671 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 CHRNB1P11230 501 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 FCARP24071 287 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 TKTP29401 623 aaKnown RBP9.9□□□□□ -0.82
SMG6-218ENST00000575454 HOXA6P31267 233 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 NAMPTP43490 491 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 CLCNKBP51801 687 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 LIMK1P53667 647 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 YARSP54577 528 aaKnown RBP9.9□□□□□ -0.82
SMG6-218ENST00000575454 ROR1Q01973 937 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 PRSS36Q5K4E3 855 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 DGKKQ5KSL6 1271 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 CEP68Q76N32 757 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 CENPQQ7L2Z9 268 aaPredicted RBP9.9□□□□□ -0.82
SMG6-218ENST00000575454 MAEAQ7L5Y9 396 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 NOSTRINQ8IVI9 506 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 MFSD6LQ8IWD5 586 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 YAF2Q8IY57 180 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 SYNPOQ8N3V7 929 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 CSGALNACT1Q8TDX6 532 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 PIGOQ8TEQ8 1089 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 LOXL4Q96JB6 756 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 NACC1Q96RE7 527 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 TM6SF1Q9BZW5 370 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 GPRC5CQ9NQ84 441 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 ASAH2Q9NR71 780 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 GDAQ9Y2T3 454 aa9.9□□□□□ -0.82
SMG6-218ENST00000575454 FLNBO75369 2602 aaKnown RBP9.9□□□□□ -0.82
SMG6-218ENST00000575454 NBEAQ8NFP9 2946 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 DSPP15924 2871 aaKnown RBP9.89□□□□□ -0.83
SMG6-218ENST00000575454 PHLPP2Q6ZVD8 1323 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 HRO43593 1189 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 NEMFO60524 1076 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 CCNE1P24864 410 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 RPL9P32969 192 aaKnown RBP9.89□□□□□ -0.83
SMG6-218ENST00000575454 KRT2P35908 639 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 TXKP42681 527 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 ARPP19P56211 112 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 SHC2P98077 582 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 SATB1Q01826 763 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 STK3Q13188 491 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 PTGDRQ13258 359 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 VITQ6UXI7 678 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 APPL2Q8NEU8 664 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 ERMNQ8TAM6 284 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 FAM200AQ8TCP9 573 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 OXER1Q8TDS5 423 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 TCEAL4Q96EI5 215 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 IFT74Q96LB3 600 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 OXCT2Q9BYC2 517 aaPredicted RBP9.89□□□□□ -0.83
SMG6-218ENST00000575454 TUFT1Q9NNX1 390 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 AFF4Q9UHB7 1163 aaKnown RBP9.89□□□□□ -0.83
SMG6-218ENST00000575454 RALYQ9UKM9 306 aaKnown RBP9.89□□□□□ -0.83
SMG6-218ENST00000575454 NUB1Q9Y5A7 615 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 INSL5Q9Y5Q6 135 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 EVPLQ92817 2033 aa9.89□□□□□ -0.83
SMG6-218ENST00000575454 IGF2RP11717 2491 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 SMIM28A0A1B0GU29 152 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 CHURC1-FNTBB4DL54 471 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 CHADO15335 359 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 LIG1P18858 919 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 CYP11B2P19099 503 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 KCNA4P22459 653 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 FNTBP49356 437 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 KPNA1P52294 538 aaPredicted RBP9.88□□□□□ -0.83
SMG6-218ENST00000575454 EPHA5P54756 1037 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 IRX6P78412 446 aaPredicted RBP9.88□□□□□ -0.83
SMG6-218ENST00000575454 PLD1Q13393 1074 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 MRPL58Q14197 206 aaKnown RBP9.88□□□□□ -0.83
SMG6-218ENST00000575454 AASDHQ4L235 1098 aaPredicted RBP9.88□□□□□ -0.83
SMG6-218ENST00000575454 GLRA4Q5JXX5 417 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 ATF7IP2Q5U623 682 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 ZNF280DQ6N043 979 aa9.88□□□□□ -0.83
SMG6-218ENST00000575454 CD300LGQ6UXG3 332 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms