RNA–Protein interactions for RNA: ENST00000575168.1

CXCL16-204, Transcript of C-X-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CXCL16, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-204ENST00000575168 MEIS3P2A8K0S8 358 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 PMM2O15305 246 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 ZC3H11AO75152 810 aaKnown RBP eCLIP13.42□□□□□ -0.26
CXCL16-204ENST00000575168 SERPINC1P01008 464 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 RB1P06400 928 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 NFICP08651 508 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 LRPAP1P30533 357 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 ATICP31939 592 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 OR1G1P47890 313 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 DSC1Q08554 894 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 KCNH2Q12809 1159 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 ZBTB6Q15916 424 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 SV2CQ496J9 727 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 WDR44Q5JSH3 913 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 GLRA4Q5JXX5 417 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 LRRC52Q8N7C0 313 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 ZSWIM2Q8NEG5 633 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 SP7Q8TDD2 431 aaPredicted RBP13.42□□□□□ -0.26
CXCL16-204ENST00000575168 BORCS6Q96GS4 357 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 FAM81BQ96LP2 452 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 SLC28A3Q9HAS3 691 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 SAMSN1Q9NSI8 373 aaKnown RBP13.42□□□□□ -0.26
CXCL16-204ENST00000575168 PUF60Q9UHX1 559 aaKnown RBP13.42□□□□□ -0.26
CXCL16-204ENST00000575168 NUB1Q9Y5A7 615 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 PTPRSQ13332 1948 aa13.42□□□□□ -0.26
CXCL16-204ENST00000575168 GTPBP10A4D1E9 387 aaKnown RBP13.41□□□□□ -0.26
CXCL16-204ENST00000575168 CBFA2T2O43439 604 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 TADA2AO75478 443 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 KRT19P08727 400 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 TRIM21P19474 475 aaKnown RBP13.41□□□□□ -0.26
CXCL16-204ENST00000575168 PIK3CAP42336 1068 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 BCAR1P56945 870 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 SGSM1Q2NKQ1 1148 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 LRIT3Q3SXY7 679 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 VWA3BQ502W6 1294 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 TRAPPC11Q7Z392 1133 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 LUZP1Q86V48 1076 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 COLGALT2Q8IYK4 626 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 GSTCDQ8NEC7 633 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 FBXL13Q8NEE6 735 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 CLP1Q92989 425 aaKnown RBP13.41□□□□□ -0.26
CXCL16-204ENST00000575168 SLC35C1Q96A29 364 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 TMEM169Q96HH4 297 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 ZMAT2Q96NC0 199 aaKnown RBP13.41□□□□□ -0.26
CXCL16-204ENST00000575168 MED15Q96RN5 788 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 MTMR12Q9C0I1 747 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 RC3H2Q9HBD1 1191 aaKnown RBP13.41□□□□□ -0.26
CXCL16-204ENST00000575168 SPG21Q9NZD8 308 aa13.41□□□□□ -0.26
CXCL16-204ENST00000575168 LRRC10BA6NIK2 292 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 TMEM189-UBE2V1I3L0A0 370 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 PODXLO00592 558 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 B3GAT3O94766 335 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 ITGB3P05106 788 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 TRIM49P0CI25 452 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 TRIM49CP0CI26 452 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 ZNF18P17022 549 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 GCLMP48507 274 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 FMO5P49326 533 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 TAF6P49848 677 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 GATMP50440 423 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 MYL7Q01449 175 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 NCOA4Q13772 614 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 NCAPHQ15003 741 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 UVSSAQ2YD98 709 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 ZACNQ401N2 412 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 C9orf57Q5W0N0 161 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 KCNT2Q6UVM3 1135 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 GBP6Q6ZN66 633 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 SV2AQ7L0J3 742 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 IRF2BP1Q8IU81 584 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 EFCAB13Q8IY85 973 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 C18orf25Q96B23 403 aaPredicted RBP13.4□□□□□ -0.26
CXCL16-204ENST00000575168 FAXDC2Q96IV6 333 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 TGS1Q96RS0 853 aaKnown RBP13.4□□□□□ -0.26
CXCL16-204ENST00000575168 C11orf84Q9BUA3 381 aaPredicted RBP13.4□□□□□ -0.26
CXCL16-204ENST00000575168 PRO3102Q9H379 93 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 NDST4Q9H3R1 872 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 NRDE2Q9H7Z3 1164 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 MIOSQ9NXC5 875 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 LIMA1Q9UHB6 759 aaKnown RBP13.4□□□□□ -0.26
CXCL16-204ENST00000575168 AGAP1Q9UPQ3 857 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 SSX2IPQ9Y2D8 614 aa13.4□□□□□ -0.26
CXCL16-204ENST00000575168 MRPL42Q9Y6G3 142 aaKnown RBP13.4□□□□□ -0.26
CXCL16-204ENST00000575168 SF3B1O75533 1304 aaKnown RBP eCLIP13.39□□□□□ -0.27
CXCL16-204ENST00000575168 TMEM265A0A087WTH1 108 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 ANO9A1A5B4 782 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 CASTOR2A6NHX0 329 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 STAU1O95793 577 aaKnown RBP13.39□□□□□ -0.27
CXCL16-204ENST00000575168 C4BPAP04003 597 aaKnown RBP13.39□□□□□ -0.27
CXCL16-204ENST00000575168 GALTP07902 379 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 CTNNB1P35222 781 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 BMPR1AP36894 532 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 RABGGTBP53611 331 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 COPB1P53618 953 aaKnown RBP13.39□□□□□ -0.27
CXCL16-204ENST00000575168 TNNC1P63316 161 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 UBE3AQ05086 875 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 KRT31Q15323 416 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 UPP1Q16831 310 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 HSP90AA4PQ58FG1 418 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 PPP2R2DQ66LE6 453 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms