RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 PTPRJQ12913 1337 aa17.62■□□□□ 0.41
PFN1-203ENST00000574872 PLXNA4Q9HCM2 1894 aa17.62■□□□□ 0.41
PFN1-203ENST00000574872 TRANK1O15050 2925 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 CARNS1A5YM72 827 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 PPEF2O14830 753 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 XPOTO43592 962 aaKnown RBP17.61■□□□□ 0.41
PFN1-203ENST00000574872 B3GAT3O94766 335 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 FOSL2P15408 326 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 CA8P35219 290 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 IRS1P35568 1242 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 LRRC63Q05C16 580 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 CAMK1Q14012 370 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 MYBPC2Q14324 1141 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 PSMD6Q15008 389 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 KLHL40Q2TBA0 621 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 SPATA1Q5VX52 437 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 PLEKHO2Q8TD55 490 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 TMEM174Q8WUU8 243 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 MFSD14AQ96MC6 490 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 FNBP1Q96RU3 617 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 MTMR12Q9C0I1 747 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 PUF60Q9UHX1 559 aaKnown RBP17.61■□□□□ 0.41
PFN1-203ENST00000574872 ADAM28Q9UKQ2 775 aa17.61■□□□□ 0.41
PFN1-203ENST00000574872 BICDL2A1A5D9 508 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 I3L4J1 428 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 CETN3O15182 167 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 TMEM191BP0C7N4 346 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 TNNI1P19237 187 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 CYP3A5P20815 502 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 ERVFC1P60507 584 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 UBE3AQ05086 875 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 SURF1Q15526 300 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 PTPROQ16827 1216 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 PLPP4Q5VZY2 271 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 TTI2Q6NXR4 508 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 FUT10Q6P4F1 479 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 DCLRE1AQ6PJP8 1040 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 TAS1R1Q7RTX1 841 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 DDX53Q86TM3 631 aaKnown RBP17.6■□□□□ 0.41
PFN1-203ENST00000574872 FAM186BQ8IYM0 893 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 VPS52Q8N1B4 723 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 MLKLQ8NB16 471 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 OR5B17Q8NGF7 314 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 MICAL1Q8TDZ2 1067 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 SYAP1Q96A49 352 aaPredicted RBP17.6■□□□□ 0.41
PFN1-203ENST00000574872 MRPL38Q96DV4 380 aaKnown RBP17.6■□□□□ 0.41
PFN1-203ENST00000574872 DDX27Q96GQ7 796 aaKnown RBP17.6■□□□□ 0.41
PFN1-203ENST00000574872 B3GALT6Q96L58 329 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 TSPAN18Q96SJ8 248 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 CGRRF1Q99675 332 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 DUSP9Q99956 384 aaKnown RBP17.6■□□□□ 0.41
PFN1-203ENST00000574872 TCF25Q9BQ70 676 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 GPR62Q9BZJ7 368 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 GZF1Q9H116 711 aaPredicted RBP17.6■□□□□ 0.41
PFN1-203ENST00000574872 ENTPD7Q9NQZ7 604 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 TLR9Q9NR96 1032 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 DPP3Q9NY33 737 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 MTCH2Q9Y6C9 303 aa17.6■□□□□ 0.41
PFN1-203ENST00000574872 PRRC2BQ5JSZ5 2229 aaKnown RBP17.6■□□□□ 0.41
PFN1-203ENST00000574872 LRPAP1P30533 357 aa17.59■□□□□ 0.41
PFN1-203ENST00000574872 RPL9P32969 192 aaKnown RBP17.59■□□□□ 0.41
PFN1-203ENST00000574872 PSMC2P35998 433 aaKnown RBP17.59■□□□□ 0.41
PFN1-203ENST00000574872 BRCC3P46736 316 aa17.59■□□□□ 0.41
PFN1-203ENST00000574872 FKBP3Q00688 224 aaKnown RBP17.59■□□□□ 0.41
PFN1-203ENST00000574872 C9orf57Q5W0N0 161 aa17.59■□□□□ 0.41
PFN1-203ENST00000574872 SASS6Q6UVJ0 657 aa17.59■□□□□ 0.41
PFN1-203ENST00000574872 CD300LGQ6UXG3 332 aa17.59■□□□□ 0.41
PFN1-203ENST00000574872 NT5DC4Q86YG4 428 aa17.59■□□□□ 0.41
PFN1-203ENST00000574872 WDR49Q8IV35 697 aa17.59■□□□□ 0.41
PFN1-203ENST00000574872 CACTINQ8WUQ7 758 aaKnown RBP17.59■□□□□ 0.41
PFN1-203ENST00000574872 AUTS2Q8WXX7 1259 aa17.59■□□□□ 0.41
PFN1-203ENST00000574872 ANKRD36BP1Q96IX9 119 aa17.59■□□□□ 0.41
PFN1-203ENST00000574872 LMAN2LQ9H0V9 348 aa17.59■□□□□ 0.41
PFN1-203ENST00000574872 INTS13Q9NVM9 706 aa17.59■□□□□ 0.41
PFN1-203ENST00000574872 LZTS1Q9Y250 596 aa17.59■□□□□ 0.41
PFN1-203ENST00000574872 NUB1Q9Y5A7 615 aa17.59■□□□□ 0.41
PFN1-203ENST00000574872 SF3B1O75533 1304 aaKnown RBP eCLIP17.58■□□□□ 0.44e-7■■■■■ 43.6
PFN1-203ENST00000574872 LRRIQ3A6PVS8 624 aaPredicted RBP17.58■□□□□ 0.4
PFN1-203ENST00000574872 C2CD2LO14523 706 aa17.58■□□□□ 0.4
PFN1-203ENST00000574872 TNNC2P02585 160 aa17.58■□□□□ 0.4
PFN1-203ENST00000574872 ITGB3P05106 788 aa17.58■□□□□ 0.4
PFN1-203ENST00000574872 EPB41P11171 864 aaKnown RBP17.58■□□□□ 0.4
PFN1-203ENST00000574872 POLR2BP30876 1174 aaKnown RBP17.58■□□□□ 0.4
PFN1-203ENST00000574872 DLG4P78352 724 aa17.58■□□□□ 0.4
PFN1-203ENST00000574872 NFKBIBQ15653 356 aa17.58■□□□□ 0.4
PFN1-203ENST00000574872 SCARA3Q6AZY7 606 aa17.58■□□□□ 0.4
PFN1-203ENST00000574872 TMC7Q7Z402 723 aa17.58■□□□□ 0.4
PFN1-203ENST00000574872 ZC3H3Q8IXZ2 948 aaKnown RBP17.58■□□□□ 0.4
PFN1-203ENST00000574872 CSGALNACT2Q8N6G5 542 aa17.58■□□□□ 0.4
PFN1-203ENST00000574872 C1orf127Q8N9H9 656 aa17.58■□□□□ 0.4
PFN1-203ENST00000574872 ZBP1Q9H171 429 aa17.58■□□□□ 0.4
PFN1-203ENST00000574872 RWDD2AQ9UIY3 292 aa17.58■□□□□ 0.4
PFN1-203ENST00000574872 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.58■□□□□ 0.4
PFN1-203ENST00000574872 TMEM189-UBE2V1I3L0A0 370 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 SOD2P04179 222 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 KRT19P08727 400 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 TRIM49P0CI25 452 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 TRIM49CP0CI26 452 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 KRT13P13646 458 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 VAMP7P51809 220 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms