RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 NT5DC4Q86YG4 428 aa25.93■■□□□ 1.74
ATPAF1-213ENST00000574428 RSAD1Q9HA92 442 aa25.93■■□□□ 1.74
ATPAF1-213ENST00000574428 ARL5CA6NH57 179 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 CST3P01034 146 aaPredicted RBP25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 TPM1P09493 284 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 FAM189BP81408 668 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 ZBTB6Q15916 424 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 MFSD5Q6N075 450 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 C7orf61Q8IZ16 206 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 NLRC4Q9NPP4 1024 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 DPP3Q9NY33 737 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 AJAP1Q9UKB5 411 aaPredicted RBP25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 CAPN11Q9UMQ6 739 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 PLAGL2Q9UPG8 496 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 FHOD1Q9Y613 1164 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 PDCD11Q14690 1871 aaKnown RBP25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 AKR1B15C9JRZ8 316 aaPredicted RBP25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 ITGB3P05106 788 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 UCHL3P15374 230 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 PHLDB3Q6NSJ2 640 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 ARHGEF19Q8IW93 802 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 GSTCDQ8NEC7 633 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 APEX2Q9UBZ4 518 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 SIX4Q9UIU6 781 aa25.92■■□□□ 1.74
ATPAF1-213ENST00000574428 MFAP3LO75121 409 aa25.91■■□□□ 1.74
ATPAF1-213ENST00000574428 CLSTN1O94985 981 aa25.91■■□□□ 1.74
ATPAF1-213ENST00000574428 KRT19P08727 400 aa25.91■■□□□ 1.74
ATPAF1-213ENST00000574428 GSDMDP57764 484 aa25.91■■□□□ 1.74
ATPAF1-213ENST00000574428 TRPC3Q13507 836 aa25.91■■□□□ 1.74
ATPAF1-213ENST00000574428 CNKSR3Q6P9H4 555 aa25.91■■□□□ 1.74
ATPAF1-213ENST00000574428 CACNA2D4Q7Z3S7 1137 aa25.91■■□□□ 1.74
ATPAF1-213ENST00000574428 TC2NQ8N9U0 490 aa25.91■■□□□ 1.74
ATPAF1-213ENST00000574428 RPS6KC1Q96S38 1066 aa25.91■■□□□ 1.74
ATPAF1-213ENST00000574428 CEP72Q9P209 647 aa25.91■■□□□ 1.74
ATPAF1-213ENST00000574428 A0A1W2PQJ5 194 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 MYL6P60660 151 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 IQCEQ6IPM2 695 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 SPOPLQ6IQ16 392 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 TMEM199Q8N511 208 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 CXorf38Q8TB03 319 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 IQCDQ96DY2 449 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 MIOSQ9NXC5 875 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 PRKAG2Q9UGJ0 569 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 ZKSCAN5Q9Y2L8 839 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 LUC7L2Q9Y383 392 aaKnown RBP25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 EOMESO95936 686 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 POLR2BP30876 1174 aaKnown RBP25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 SCNN1GP51170 649 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 RRAGAQ7L523 313 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 BEST2Q8NFU1 509 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 PPP1R10Q96QC0 940 aaKnown RBP25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 UBN1Q9NPG3 1134 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 ITGA11Q9UKX5 1188 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 UBQLN1Q9UMX0 589 aaKnown RBP25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 INPP5FQ9Y2H2 1132 aa25.9■■□□□ 1.74
ATPAF1-213ENST00000574428 CCDC85CA6NKD9 419 aa25.89■■□□□ 1.73
ATPAF1-213ENST00000574428 FGFR1P11362 822 aa25.89■■□□□ 1.73
ATPAF1-213ENST00000574428 KRT9P35527 623 aa25.89■■□□□ 1.73
ATPAF1-213ENST00000574428 SOX4Q06945 474 aaPredicted RBP25.89■■□□□ 1.73
ATPAF1-213ENST00000574428 WDR44Q5JSH3 913 aa25.89■■□□□ 1.73
ATPAF1-213ENST00000574428 FAM43BQ6ZT52 329 aaPredicted RBP25.89■■□□□ 1.73
ATPAF1-213ENST00000574428 CNGA4Q8IV77 575 aa25.89■■□□□ 1.73
ATPAF1-213ENST00000574428 BAP1Q92560 729 aa25.89■■□□□ 1.73
ATPAF1-213ENST00000574428 TATDN2Q93075 761 aa25.89■■□□□ 1.73
ATPAF1-213ENST00000574428 NT5C1BQ96P26 610 aa25.89■■□□□ 1.73
ATPAF1-213ENST00000574428 TSPAN18Q96SJ8 248 aa25.89■■□□□ 1.73
ATPAF1-213ENST00000574428 GOLGA2P5Q9HBQ8 144 aa25.89■■□□□ 1.73
ATPAF1-213ENST00000574428 TMEM161AQ9NX61 479 aa25.89■■□□□ 1.73
ATPAF1-213ENST00000574428 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.89■■□□□ 1.73
ATPAF1-213ENST00000574428 ZBED6P86452 979 aa25.88■■□□□ 1.73
ATPAF1-213ENST00000574428 RAPGEF1Q13905 1077 aa25.88■■□□□ 1.73
ATPAF1-213ENST00000574428 IKBKEQ14164 716 aa25.88■■□□□ 1.73
ATPAF1-213ENST00000574428 PPM1KQ8N3J5 372 aa25.88■■□□□ 1.73
ATPAF1-213ENST00000574428 CCDC150Q8NCX0 1101 aa25.88■■□□□ 1.73
ATPAF1-213ENST00000574428 HELQQ8TDG4 1101 aa25.88■■□□□ 1.73
ATPAF1-213ENST00000574428 NAA15Q9BXJ9 866 aaKnown RBP25.88■■□□□ 1.73
ATPAF1-213ENST00000574428 APOBEC3GQ9HC16 384 aaKnown RBP25.88■■□□□ 1.73
ATPAF1-213ENST00000574428 UBE2TQ9NPD8 197 aaPredicted RBP25.88■■□□□ 1.73
ATPAF1-213ENST00000574428 DNAJC12Q9UKB3 198 aa25.88■■□□□ 1.73
ATPAF1-213ENST00000574428 AGAP1Q9UPQ3 857 aa25.88■■□□□ 1.73
ATPAF1-213ENST00000574428 ZC3H11AO75152 810 aaKnown RBP eCLIP25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 OFD1O75665 1012 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 ASS1P00966 412 aaKnown RBP25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 ACRP10323 421 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 NOP14P78316 857 aaKnown RBP25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 CLLU1OSQ5K130 101 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 GPIHBP1Q8IV16 184 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 ZNF397Q8NF99 534 aaPredicted RBP25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 KAT5Q92993 513 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 EDEM3Q9BZQ6 932 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 IMPG2Q9BZV3 1241 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 XYLT2Q9H1B5 865 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 FBXL5Q9UKA1 691 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 XPOTO43592 962 aaKnown RBP25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 POMCP01189 267 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 THP07101 528 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 ZNF699Q32M78 642 aa25.87■■□□□ 1.73
ATPAF1-213ENST00000574428 GLB1LQ6UWU2 654 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms