RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 TUBGCP4Q9UGJ1 667 aa19.03■□□□□ 0.64
SMG6-214ENST00000573827 NOTCH4Q99466 2003 aa19.03■□□□□ 0.64
SMG6-214ENST00000573827 MYMKA6NI61 221 aa19.02■□□□□ 0.64
SMG6-214ENST00000573827 K7ENM7 598 aa19.02■□□□□ 0.64
SMG6-214ENST00000573827 PDGFBP01127 241 aaPredicted RBP19.02■□□□□ 0.64
SMG6-214ENST00000573827 RPL9P32969 192 aaKnown RBP19.02■□□□□ 0.64
SMG6-214ENST00000573827 MTMR3Q13615 1198 aa19.02■□□□□ 0.64
SMG6-214ENST00000573827 ENOX2Q16206 610 aaKnown RBP19.02■□□□□ 0.64
SMG6-214ENST00000573827 PDXDC1Q6P996 788 aa19.02■□□□□ 0.64
SMG6-214ENST00000573827 UBALD2Q8IYN6 164 aa19.02■□□□□ 0.64
SMG6-214ENST00000573827 IKZF4Q9H2S9 585 aa19.02■□□□□ 0.64
SMG6-214ENST00000573827 ZSCAN16Q9H4T2 348 aaPredicted RBP19.02■□□□□ 0.64
SMG6-214ENST00000573827 PLEKHA5Q9HAU0 1116 aa19.02■□□□□ 0.64
SMG6-214ENST00000573827 EPS15L1Q9UBC2 864 aa19.02■□□□□ 0.64
SMG6-214ENST00000573827 KMT2EQ8IZD2 1858 aa19.02■□□□□ 0.64
SMG6-214ENST00000573827 TISP43B9A030 160 aa19.01■□□□□ 0.63
SMG6-214ENST00000573827 HNRNPDLO14979 420 aaKnown RBP19.01■□□□□ 0.63
SMG6-214ENST00000573827 POU2F2P09086 479 aa19.01■□□□□ 0.63
SMG6-214ENST00000573827 LRPAP1P30533 357 aa19.01■□□□□ 0.63
SMG6-214ENST00000573827 HOXA9P31269 272 aa19.01■□□□□ 0.63
SMG6-214ENST00000573827 OR1D2P34982 312 aa19.01■□□□□ 0.63
SMG6-214ENST00000573827 ZC2HC1CQ53FD0 456 aaPredicted RBP19.01■□□□□ 0.63
SMG6-214ENST00000573827 IER5LQ5T953 404 aa19.01■□□□□ 0.63
SMG6-214ENST00000573827 SLC8B1Q6J4K2 584 aa19.01■□□□□ 0.63
SMG6-214ENST00000573827 ELMSAN1Q6PJG2 1045 aa19.01■□□□□ 0.63
SMG6-214ENST00000573827 FBXL6Q8N531 539 aa19.01■□□□□ 0.63
SMG6-214ENST00000573827 LINC00301Q8NCQ3 95 aa19.01■□□□□ 0.63
SMG6-214ENST00000573827 KCNK12Q9HB15 430 aa19.01■□□□□ 0.63
SMG6-214ENST00000573827 CDY1Q9Y6F8 540 aa19.01■□□□□ 0.63
SMG6-214ENST00000573827 STYXL1Q9Y6J8 313 aa19.01■□□□□ 0.63
SMG6-214ENST00000573827 ZFHX2Q9C0A1 2572 aaPredicted RBP19.01■□□□□ 0.63
SMG6-214ENST00000573827 SPDYE4A6NLX3 237 aa19■□□□□ 0.63
SMG6-214ENST00000573827 ANKRD63C9JTQ0 380 aa19■□□□□ 0.63
SMG6-214ENST00000573827 SYN3O14994 580 aa19■□□□□ 0.63
SMG6-214ENST00000573827 C8AP07357 584 aa19■□□□□ 0.63
SMG6-214ENST00000573827 HNRNPA1P09651 372 aaKnown RBP eCLIP19■□□□□ 0.63
SMG6-214ENST00000573827 AARSP49588 968 aaKnown RBP eCLIP19■□□□□ 0.63
SMG6-214ENST00000573827 LIG4P49917 911 aa19■□□□□ 0.63
SMG6-214ENST00000573827 VCPP55072 806 aaKnown RBP19■□□□□ 0.63
SMG6-214ENST00000573827 SPAG1Q07617 926 aa19■□□□□ 0.63
SMG6-214ENST00000573827 VARS2Q5ST30 1063 aaKnown RBP19■□□□□ 0.63
SMG6-214ENST00000573827 ANKS3Q6ZW76 656 aa19■□□□□ 0.63
SMG6-214ENST00000573827 ZNF720Q7Z2F6 126 aa19■□□□□ 0.63
SMG6-214ENST00000573827 KRI1Q8N9T8 703 aaKnown RBP19■□□□□ 0.63
SMG6-214ENST00000573827 RASSF8Q8NHQ8 419 aa19■□□□□ 0.63
SMG6-214ENST00000573827 ACSF2Q96CM8 615 aaPredicted RBP19■□□□□ 0.63
SMG6-214ENST00000573827 SUSD3Q96L08 255 aa19■□□□□ 0.63
SMG6-214ENST00000573827 KCNH6Q9H252 994 aa19■□□□□ 0.63
SMG6-214ENST00000573827 CPSF3Q9UKF6 684 aaKnown RBP19■□□□□ 0.63
SMG6-214ENST00000573827 FRMD3A2A2Y4 597 aa18.99■□□□□ 0.63
SMG6-214ENST00000573827 LACTBL1A8MY62 500 aa18.99■□□□□ 0.63
SMG6-214ENST00000573827 OGTO15294 1046 aa18.99■□□□□ 0.63
SMG6-214ENST00000573827 TRAPPC3O43617 180 aa18.99■□□□□ 0.63
SMG6-214ENST00000573827 TBCAO75347 108 aaKnown RBP18.99■□□□□ 0.63
SMG6-214ENST00000573827 ABLIM3O94929 683 aa18.99■□□□□ 0.63
SMG6-214ENST00000573827 KRT18P05783 430 aaKnown RBP18.99■□□□□ 0.63
SMG6-214ENST00000573827 ADSSP30520 456 aa18.99■□□□□ 0.63
SMG6-214ENST00000573827 SFR1Q86XK3 245 aa18.99■□□□□ 0.63
SMG6-214ENST00000573827 DDX12PQ92771 950 aa18.99■□□□□ 0.63
SMG6-214ENST00000573827 FAM122AQ96E09 287 aa18.99■□□□□ 0.63
SMG6-214ENST00000573827 BICD1Q96G01 975 aa18.99■□□□□ 0.63
SMG6-214ENST00000573827 CCDC39Q9UFE4 941 aa18.99■□□□□ 0.63
SMG6-214ENST00000573827 MYH15Q9Y2K3 1946 aa18.98■□□□□ 0.63
SMG6-214ENST00000573827 M0QZQ0 153 aa18.98■□□□□ 0.63
SMG6-214ENST00000573827 CYP3A5P20815 502 aa18.98■□□□□ 0.63
SMG6-214ENST00000573827 GUCY2FP51841 1108 aa18.98■□□□□ 0.63
SMG6-214ENST00000573827 NTHL1P78549 312 aa18.98■□□□□ 0.63
SMG6-214ENST00000573827 ROR1Q01973 937 aa18.98■□□□□ 0.63
SMG6-214ENST00000573827 KCNA1Q09470 495 aa18.98■□□□□ 0.63
SMG6-214ENST00000573827 E2F4Q16254 413 aa18.98■□□□□ 0.63
SMG6-214ENST00000573827 AXDND1Q5T1B0 1012 aaPredicted RBP18.98■□□□□ 0.63
SMG6-214ENST00000573827 RRAGBQ5VZM2 374 aa18.98■□□□□ 0.63
SMG6-214ENST00000573827 DYMQ7RTS9 669 aa18.98■□□□□ 0.63
SMG6-214ENST00000573827 PRSS33Q8NF86 280 aa18.98■□□□□ 0.63
SMG6-214ENST00000573827 SLC7A14Q8TBB6 771 aa18.98■□□□□ 0.63
SMG6-214ENST00000573827 STAMQ92783 540 aa18.98■□□□□ 0.63
SMG6-214ENST00000573827 FGFBP2Q9BYJ0 223 aa18.98■□□□□ 0.63
SMG6-214ENST00000573827 ANK1P16157 1881 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 WDR27A2RRH5 827 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 ANHXE9PGG2 379 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 PPEF2O14830 753 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 LAMP2P13473 410 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 TDGQ13569 410 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 KYAT1Q16773 422 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 UVSSAQ2YD98 709 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 LIN9Q5TKA1 542 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 POTEHQ6S545 545 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 CRELD2Q6UXH1 353 aaPredicted RBP18.97■□□□□ 0.63
SMG6-214ENST00000573827 RTL10Q7L3V2 364 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 GRASPQ7Z6J2 395 aaPredicted RBP18.97■□□□□ 0.63
SMG6-214ENST00000573827 ZNF461Q8TAF7 563 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 RSAD2Q8WXG1 361 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 MSTO1Q9BUK6 570 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 PANK2Q9BZ23 570 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 ZHX3Q9H4I2 956 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 IGSF9Q9P2J2 1179 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 FBXL5Q9UKA1 691 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 UBQLN1Q9UMX0 589 aaKnown RBP18.97■□□□□ 0.63
SMG6-214ENST00000573827 DUSP12Q9UNI6 340 aa18.97■□□□□ 0.63
SMG6-214ENST00000573827 RIF1Q5UIP0 2472 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms