RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 KYNUQ16719 465 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 KIF19Q2TAC6 998 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 TTC39BQ5VTQ0 682 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 C7orf31Q8N865 590 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 NOA1Q8NC60 698 aaKnown RBP13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 OR6B3Q8NGW1 331 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 ZFATQ9P243 1243 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 FER1L4A9Z1Z3 1794 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 RNF103-CHMP3A0A140T963 221 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 TBX2Q13207 712 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 SCFD1Q8WVM8 642 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 CEP19Q96LK0 163 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 MED15Q96RN5 788 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 EPAS1Q99814 870 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 ZSWIM1Q9BR11 485 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 SEPT3Q9UH03 358 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 KANSL1LA0AUZ9 987 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 DEAF1O75398 565 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 HNRNPH1P31943 449 aaKnown RBP13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 HSD17B3P37058 310 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 BOLA3Q53S33 107 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 RGS9BPQ6ZS82 235 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 ABI1Q8IZP0 508 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 MCUQ8NE86 351 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 IRX2Q9BZI1 471 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 POLR3FQ9H1D9 316 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 VPS11Q9H270 941 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 EHD2Q9NZN4 543 aa13.04□□□□□ -0.32
PCDHGA9-201ENST00000573521 TMEM120BA0PK00 339 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 DYTNA2CJ06 578 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 SLCO1B7G3V0H7 640 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 MAGEB2O15479 319 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 SNX2O60749 519 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 UBXN2AP68543 259 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 TTLL4Q14679 1199 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 ELMSAN1Q6PJG2 1045 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 TMC2Q8TDI7 906 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 REEP2Q9BRK0 252 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 FSD1LQ9BXM9 530 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 RNF146Q9NTX7 359 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 TMEM260Q9NX78 707 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 IGSF9BQ9UPX0 1349 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 PP2D1A8MPX8 630 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 YWHABP31946 246 aaKnown RBP13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 CARSP49589 748 aaKnown RBP13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 STRIP1Q5VSL9 837 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 CATSPER4Q7RTX7 472 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 THNSL1Q8IYQ7 743 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 DCLRE1BQ9H816 532 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 RPL26L1Q9UNX3 145 aaKnown RBP13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 ASB14A6NK59 587 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 SPDYE16A6NNV3 312 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 MAN1A2O60476 641 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 XPAP23025 273 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 GEMIN4P57678 1058 aaKnown RBP13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 PPARDQ03181 441 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 CYLC2Q14093 348 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 RABGAP1LQ5R372 815 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 TNIP2Q8NFZ5 429 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 RIN3Q8TB24 985 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 ATXN2LQ8WWM7 1075 aaKnown RBP13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 H0Y3Z8 333 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 M0QYV0 167 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 FKBP6O75344 327 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 KLRC1P26715 233 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 FDFT1P37268 417 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 CDH6P55285 790 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 RBP5P82980 135 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 ANO4Q32M45 955 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 CYB5D1Q6P9G0 228 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 ZBTB33Q86T24 672 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 TTLL6Q8N841 843 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 CXorf38Q8TB03 319 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 RBM46Q8TBY0 533 aaKnown RBP13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 CELF1Q92879 486 aaKnown RBP13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 CENPTQ96BT3 561 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 YIPF3Q9GZM5 350 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 SYNPO2Q9UMS6 1093 aa13.03□□□□□ -0.32
PCDHGA9-201ENST00000573521 GPR75-ASB3A0A0A6YYF3 556 aa13.02□□□□□ -0.32
PCDHGA9-201ENST00000573521 C19orf81C9J6K1 198 aa13.02□□□□□ -0.32
PCDHGA9-201ENST00000573521 DIAPH2O60879 1101 aa13.02□□□□□ -0.32
PCDHGA9-201ENST00000573521 KCNA4P22459 653 aa13.02□□□□□ -0.32
PCDHGA9-201ENST00000573521 HSD17B4P51659 736 aa13.02□□□□□ -0.32
PCDHGA9-201ENST00000573521 TSPY1Q01534 308 aa13.02□□□□□ -0.32
PCDHGA9-201ENST00000573521 PPP6R3Q5H9R7 873 aaPredicted RBP13.02□□□□□ -0.32
PCDHGA9-201ENST00000573521 DSTYKQ6XUX3 929 aa13.02□□□□□ -0.32
PCDHGA9-201ENST00000573521 RHPN2Q8IUC4 686 aa13.02□□□□□ -0.32
PCDHGA9-201ENST00000573521 CD302Q8IX05 232 aa13.02□□□□□ -0.32
PCDHGA9-201ENST00000573521 CCDC126Q96EE4 140 aa13.02□□□□□ -0.32
PCDHGA9-201ENST00000573521 PHACTR1Q9C0D0 580 aa13.02□□□□□ -0.32
PCDHGA9-201ENST00000573521 MMADHCQ9H3L0 296 aaPredicted RBP13.02□□□□□ -0.32
PCDHGA9-201ENST00000573521 EPB41L4AQ9HCS5 686 aaPredicted RBP13.02□□□□□ -0.32
PCDHGA9-201ENST00000573521 DCTN4Q9UJW0 460 aa13.02□□□□□ -0.32
PCDHGA9-201ENST00000573521 TM9SF1O15321 606 aa13.02□□□□□ -0.33
PCDHGA9-201ENST00000573521 APOA1P02647 267 aa13.02□□□□□ -0.33
PCDHGA9-201ENST00000573521 PRKAA2P54646 552 aa13.02□□□□□ -0.33
PCDHGA9-201ENST00000573521 CNGA3Q16281 694 aa13.02□□□□□ -0.33
PCDHGA9-201ENST00000573521 KRT82Q9NSB4 513 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms