RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 Q6ZVU0 165 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 BRAPQ7Z569 592 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 TMEM173Q86WV6 379 aaPredicted RBP8.19□□□□□ -1.1
NUP88-205ENST00000572809 COLGALT2Q8IYK4 626 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 TMEM87AQ8NBN3 555 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 PLIN2Q99541 437 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 MMTAG2Q9BU76 263 aaKnown RBP8.19□□□□□ -1.1
NUP88-205ENST00000572809 APOL6Q9BWW8 343 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 NT5C3AQ9H0P0 336 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 STK39Q9UEW8 545 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 PARP2Q9UGN5 583 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 BARX2Q9UMQ3 279 aaPredicted RBP8.19□□□□□ -1.1
NUP88-205ENST00000572809 BRWD1Q9NSI6 2320 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 ATG2AQ2TAZ0 1938 aa8.19□□□□□ -1.1
NUP88-205ENST00000572809 VPS37CA5D8V6 355 aaPredicted RBP8.18□□□□□ -1.1
NUP88-205ENST00000572809 CCDC169A6NNP5 214 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 PI4K2BG5E9Z4 385 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 B4GALT3O60512 393 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 CLASP2O75122 1294 aaKnown RBP8.18□□□□□ -1.1
NUP88-205ENST00000572809 BMP15O95972 392 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 PRKCBP05771 671 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 SRGAP2BP0DMP2 458 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 CTSAP10619 480 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 MLH1P40692 756 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 CTSOP43234 321 aaPredicted RBP8.18□□□□□ -1.1
NUP88-205ENST00000572809 OR1G1P47890 313 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 SCNN1GP51170 649 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 PEX3P56589 373 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 SF3A1Q15459 793 aaKnown RBP8.18□□□□□ -1.1
NUP88-205ENST00000572809 PLA2G4EQ3MJ16 856 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 ANKRD54Q6NXT1 300 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 LLGL2Q6P1M3 1020 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 C1orf186Q6ZWK4 172 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 TAS1R3Q7RTX0 852 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 KCNK18Q7Z418 384 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 ADHFE1Q8IWW8 467 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 SYT2Q8N9I0 419 aaPredicted RBP8.18□□□□□ -1.1
NUP88-205ENST00000572809 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.18□□□□□ -1.1
NUP88-205ENST00000572809 SMRP1Q8NCR6 262 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 VN1R2Q8NFZ6 395 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 BCL7CQ8WUZ0 217 aaPredicted RBP8.18□□□□□ -1.1
NUP88-205ENST00000572809 AUTS2Q8WXX7 1259 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 INTS4Q96HW7 963 aaKnown RBP8.18□□□□□ -1.1
NUP88-205ENST00000572809 CDK5RAP3Q96JB5 506 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 AK8Q96MA6 479 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 DRC1Q96MC2 740 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 PNMA5Q96PV4 448 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 ADPGKQ9BRR6 497 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 COLEC11Q9BWP8 271 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 C1QTNF1Q9BXJ1 281 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 CCDC113Q9H0I3 377 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 ZBP1Q9H171 429 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 NXF3Q9H4D5 531 aaKnown RBP8.18□□□□□ -1.1
NUP88-205ENST00000572809 PDZD7Q9H5P4 517 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 EPHX3Q9H6B9 360 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 C17orf75Q9HAS0 396 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 SNTG2Q9NY99 539 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 KLK14Q9P0G3 267 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 KCNG1Q9UIX4 513 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 USP20Q9Y2K6 914 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 IRAK3Q9Y616 596 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 XIRP2A4UGR9 3374 aa8.18□□□□□ -1.1
NUP88-205ENST00000572809 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.17□□□□□ -1.1
NUP88-205ENST00000572809 SLC26A4O43511 780 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 HIP1RO75146 1068 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 SSBP05455 408 aaKnown RBP eCLIP8.17□□□□□ -1.1
NUP88-205ENST00000572809 CELA2BP08218 269 aaPredicted RBP8.17□□□□□ -1.1
NUP88-205ENST00000572809 PLA2G4BP0C869 781 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 HOXB8P17481 243 aaPredicted RBP8.17□□□□□ -1.1
NUP88-205ENST00000572809 SYT1P21579 422 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 GUCY2CP25092 1073 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 LONP1P36776 959 aaKnown RBP8.17□□□□□ -1.1
NUP88-205ENST00000572809 UBA7P41226 1012 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 SCTRP47872 440 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 NPTX2P47972 431 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 ZP2Q05996 745 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 DSC1Q08554 894 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 DMP1Q13316 513 aaPredicted RBP8.17□□□□□ -1.1
NUP88-205ENST00000572809 NT5DC1Q5TFE4 455 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 ATF7IP2Q5U623 682 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 CABP7Q86V35 215 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 DAW1Q8N136 415 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 GSTCDQ8NEC7 633 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 CASP10Q92851 521 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 CALML4Q96GE6 196 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 KLHL5Q96PQ7 755 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 RPS6KC1Q96S38 1066 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 POP1Q99575 1024 aaKnown RBP8.17□□□□□ -1.1
NUP88-205ENST00000572809 NTPCRQ9BSD7 190 aaKnown RBP8.17□□□□□ -1.1
NUP88-205ENST00000572809 KIFC3Q9BVG8 833 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 RUSC1Q9BVN2 902 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 TIPINQ9BVW5 301 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 VN1R3Q9BXE9 311 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 S1PR5Q9H228 398 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 KMT5AQ9NQR1 393 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 TMPRSS4Q9NRS4 437 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 SSX2IPQ9Y2D8 614 aa8.17□□□□□ -1.1
NUP88-205ENST00000572809 PRG3Q9Y2Y8 225 aaPredicted RBP8.17□□□□□ -1.1
NUP88-205ENST00000572809 USP15Q9Y4E8 981 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms