RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 ANP32AP39687 249 aaKnown RBP22.47■■□□□ 1.19
CHMP6-204ENST00000572778 CLCN4P51793 760 aa22.47■■□□□ 1.19
CHMP6-204ENST00000572778 SMAD2Q15796 467 aaKnown RBP22.47■■□□□ 1.19
CHMP6-204ENST00000572778 SYCE2Q6PIF2 218 aa22.47■■□□□ 1.19
CHMP6-204ENST00000572778 CD300LGQ6UXG3 332 aa22.47■■□□□ 1.19
CHMP6-204ENST00000572778 GLYCTKQ8IVS8 523 aa22.47■■□□□ 1.19
CHMP6-204ENST00000572778 GPR65Q8IYL9 337 aa22.47■■□□□ 1.19
CHMP6-204ENST00000572778 NOC3LQ8WTT2 800 aaKnown RBP22.47■■□□□ 1.19
CHMP6-204ENST00000572778 SAAL1Q96ER3 474 aa22.47■■□□□ 1.19
CHMP6-204ENST00000572778 PCIF1Q9H4Z3 704 aa22.47■■□□□ 1.19
CHMP6-204ENST00000572778 SLC39A2Q9NP94 309 aa22.47■■□□□ 1.19
CHMP6-204ENST00000572778 USP15Q9Y4E8 981 aaPredicted RBP22.47■■□□□ 1.19
CHMP6-204ENST00000572778 NUB1Q9Y5A7 615 aa22.47■■□□□ 1.19
CHMP6-204ENST00000572778 VCANP13611 3396 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 EIF3DO15371 548 aaKnown RBP eCLIP22.46■■□□□ 1.19
CHMP6-204ENST00000572778 XPOTO43592 962 aaKnown RBP22.46■■□□□ 1.19
CHMP6-204ENST00000572778 LDHAP00338 332 aaKnown RBP22.46■■□□□ 1.19
CHMP6-204ENST00000572778 ADRB2P07550 413 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 RPL17P18621 184 aaKnown RBP22.46■■□□□ 1.19
CHMP6-204ENST00000572778 CYP3A5P20815 502 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 GARTP22102 1010 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 EHHADHQ08426 723 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 ZBTB6Q15916 424 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 JADE1Q6IE81 842 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 ARMCX5Q6P1M9 558 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 CRELD2Q6UXH1 353 aaPredicted RBP22.46■■□□□ 1.19
CHMP6-204ENST00000572778 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.46■■□□□ 1.19
CHMP6-204ENST00000572778 EPM2AIP1Q7L775 607 aaPredicted RBP22.46■■□□□ 1.19
CHMP6-204ENST00000572778 TMEM130Q8N3G9 435 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 ZNF507Q8TCN5 953 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 TSPAN18Q96SJ8 248 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 CBWD1Q9BRT8 395 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 FAM213AQ9BRX8 229 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 S1PR5Q9H228 398 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 EXOC1Q9NV70 894 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 DZANK1Q9NVP4 752 aa22.46■■□□□ 1.19
CHMP6-204ENST00000572778 CIZ1Q9ULV3 898 aaPredicted RBP22.46■■□□□ 1.19
CHMP6-204ENST00000572778 BRWD1Q9NSI6 2320 aa22.45■■□□□ 1.18
CHMP6-204ENST00000572778 GOLGA8IPA6NC78 632 aa22.45■■□□□ 1.18
CHMP6-204ENST00000572778 GOLGA8JA6NMD2 632 aa22.45■■□□□ 1.18
CHMP6-204ENST00000572778 GUCY2FP51841 1108 aa22.45■■□□□ 1.18
CHMP6-204ENST00000572778 CREMQ03060 361 aa22.45■■□□□ 1.18
CHMP6-204ENST00000572778 PSMD5Q16401 504 aa22.45■■□□□ 1.18
CHMP6-204ENST00000572778 KRBA2Q6ZNG9 492 aa22.45■■□□□ 1.18
CHMP6-204ENST00000572778 PALB2Q86YC2 1186 aa22.45■■□□□ 1.18
CHMP6-204ENST00000572778 NELFCDQ8IXH7 590 aa22.45■■□□□ 1.18
CHMP6-204ENST00000572778 C12orf76Q8N812 135 aaPredicted RBP22.45■■□□□ 1.18
CHMP6-204ENST00000572778 ZSWIM2Q8NEG5 633 aa22.45■■□□□ 1.18
CHMP6-204ENST00000572778 BEST2Q8NFU1 509 aa22.45■■□□□ 1.18
CHMP6-204ENST00000572778 LNX1Q8TBB1 728 aaPredicted RBP22.45■■□□□ 1.18
CHMP6-204ENST00000572778 PIK3R5Q8WYR1 880 aa22.45■■□□□ 1.18
CHMP6-204ENST00000572778 FBXL18Q96ME1 805 aa22.45■■□□□ 1.18
CHMP6-204ENST00000572778 ASB7Q9H672 318 aa22.45■■□□□ 1.18
CHMP6-204ENST00000572778 FNIP2Q9P278 1114 aa22.45■■□□□ 1.18
CHMP6-204ENST00000572778 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.45■■□□□ 1.18
CHMP6-204ENST00000572778 KLRC4O43908 158 aa22.44■■□□□ 1.18
CHMP6-204ENST00000572778 ZNF202O95125 648 aa22.44■■□□□ 1.18
CHMP6-204ENST00000572778 GLUD1P00367 558 aa22.44■■□□□ 1.18
CHMP6-204ENST00000572778 NFICP08651 508 aa22.44■■□□□ 1.18
CHMP6-204ENST00000572778 FGFR3P22607 806 aa22.44■■□□□ 1.18
CHMP6-204ENST00000572778 TKTP29401 623 aaKnown RBP22.44■■□□□ 1.18
CHMP6-204ENST00000572778 HOXD13P35453 343 aa22.44■■□□□ 1.18
CHMP6-204ENST00000572778 TMEM132DQ14C87 1099 aa22.44■■□□□ 1.18
CHMP6-204ENST00000572778 RARS2Q5T160 578 aaKnown RBP22.44■■□□□ 1.18
CHMP6-204ENST00000572778 PDXDC1Q6P996 788 aa22.44■■□□□ 1.18
CHMP6-204ENST00000572778 TNFRSF10AO00220 468 aa22.43■■□□□ 1.18
CHMP6-204ENST00000572778 EXTL3O43909 919 aa22.43■■□□□ 1.18
CHMP6-204ENST00000572778 MYL1P05976 194 aa22.43■■□□□ 1.18
CHMP6-204ENST00000572778 LRPAP1P30533 357 aa22.43■■□□□ 1.18
CHMP6-204ENST00000572778 MCM4P33991 863 aa22.43■■□□□ 1.18
CHMP6-204ENST00000572778 POU5F1Q01860 360 aaKnown RBP22.43■■□□□ 1.18
CHMP6-204ENST00000572778 KMT5BQ4FZB7 885 aa22.43■■□□□ 1.18
CHMP6-204ENST00000572778 SPATA1Q5VX52 437 aa22.43■■□□□ 1.18
CHMP6-204ENST00000572778 CES5AQ6NT32 575 aa22.43■■□□□ 1.18
CHMP6-204ENST00000572778 KANK3Q6NY19 840 aa22.43■■□□□ 1.18
CHMP6-204ENST00000572778 SCFD1Q8WVM8 642 aa22.43■■□□□ 1.18
CHMP6-204ENST00000572778 DERAQ9Y315 318 aa22.43■■□□□ 1.18
CHMP6-204ENST00000572778 UBE4BO95155 1302 aa22.42■■□□□ 1.18
CHMP6-204ENST00000572778 TCF20Q9UGU0 1960 aaKnown RBP22.42■■□□□ 1.18
CHMP6-204ENST00000572778 IL18RAPO95256 599 aa22.42■■□□□ 1.18
CHMP6-204ENST00000572778 RPN1P04843 607 aaKnown RBP22.42■■□□□ 1.18
CHMP6-204ENST00000572778 PRR29P0C7W0 189 aa22.42■■□□□ 1.18
CHMP6-204ENST00000572778 SPATA31D3P0C874 917 aa22.42■■□□□ 1.18
CHMP6-204ENST00000572778 SSTR3P32745 418 aaPredicted RBP22.42■■□□□ 1.18
CHMP6-204ENST00000572778 ITIH3Q06033 890 aa22.42■■□□□ 1.18
CHMP6-204ENST00000572778 SPATA31D4Q6ZUB0 917 aa22.42■■□□□ 1.18
CHMP6-204ENST00000572778 GPD1LQ8N335 351 aa22.42■■□□□ 1.18
CHMP6-204ENST00000572778 CLSTN3Q9BQT9 956 aa22.42■■□□□ 1.18
CHMP6-204ENST00000572778 ADAM7Q9H2U9 754 aa22.42■■□□□ 1.18
CHMP6-204ENST00000572778 MAN1C1Q9NR34 630 aa22.42■■□□□ 1.18
CHMP6-204ENST00000572778 RBAKQ9NYW8 714 aaPredicted RBP22.42■■□□□ 1.18
CHMP6-204ENST00000572778 PRKAG3Q9UGI9 489 aa22.42■■□□□ 1.18
CHMP6-204ENST00000572778 DPP7Q9UHL4 492 aa22.42■■□□□ 1.18
CHMP6-204ENST00000572778 C2CD2Q9Y426 696 aa22.42■■□□□ 1.18
CHMP6-204ENST00000572778 TGFB1I1O43294 461 aa22.41■■□□□ 1.18
CHMP6-204ENST00000572778 TGM5O43548 720 aa22.41■■□□□ 1.18
CHMP6-204ENST00000572778 STK4Q13043 487 aa22.41■■□□□ 1.18
CHMP6-204ENST00000572778 PSMD2Q13200 908 aa22.41■■□□□ 1.18
CHMP6-204ENST00000572778 ELMSAN1Q6PJG2 1045 aa22.41■■□□□ 1.18
CHMP6-204ENST00000572778 TMC5Q6UXY8 1006 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms